TCONS_00069649-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069649-protein
Unique NameTCONS_00069649-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length268

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069649-protein ID=TCONS_00069649-protein|Name=TCONS_00069649-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
VKIRFDVWKKISNRNNKSTYLKYHINLIEPSKLFRIRYLKTYEDTVLIIN
KMTASSSTPPSTPRKAHKVVLIGDSQCGKSSLLRRYTRKSFEEDYMPTVF
DSGSADIVADQNNDIQVNIWDTSGSGEYDHVRPLSFGEATVFIVCFDITK
STTLENIQRKWLPEIRQRHADRPIILVGCKSDLKADQKLTNIHKRLVLSS
QGLLLAKHIGAIAYYECSSKVEDTPETINSLFETAAMASTGSLGKISKEH
RIKFDKKKNKAYEKCTIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043364XLOC_043364Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069649TCONS_00069649Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR003578Small_GTPase_Rho
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
cellular_component GO:0005622 intracellular
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 67..88
score: 45.26
coord: 108..130
score: 27.08
coord: 90..106
score: 27.58
coord: 170..183
score: 48.56
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 69..242
e-value: 4.3E-50
score: 182.4
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 67..242
e-value: 6.2E-13
score: 51.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 64..242
e-value: 1.3E-10
score: 34.4
NoneNo IPR availableGENE3D3.30.70.1390coord: 65..130
e-value: 4.7E-17
score: 61.2
NoneNo IPR availableGENE3D3.40.50.300coord: 131..240
e-value: 3.3E-20
score: 71.4
NoneNo IPR availableCDDcd00157Rhocoord: 68..236
e-value: 3.42189E-60
score: 189.677
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 68..235
e-value: 3.0E-40
score: 137.4
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 66..189
e-value: 7.6E-25
score: 85.6
IPR003578Small GTPase superfamily, Rho typePROSITEPS51420RHOcoord: 60..239
score: 18.262
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 66..234

Blast
[Close]
BLAST of TCONS_00069649-protein vs. Swiss-Prot (Human)
Match: RHOD (Rho-related GTP-binding protein RhoD OS=Homo sapiens GN=RHOD PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 4.489e-43
Identity = 72/197 (36.55%), Postives = 117/197 (59.39%), Query Frame = 0 
Query:   53 TASSSTPPSTPRKAHKVVLIGDSQCGKSSLLRRYTRKSFEEDYMPTVFDSGSADIVADQNNDIQVNIWDTSGSGEYDHVRPLSFGEATVFIVCFDITKSTTLENIQRKWLPEIRQRHADRPIILVGCKSDLKADQKLTNIHKR----LVLSSQGLLLAKHIGAIAYYECSSKVEDTPETINSLFETAAMASTGSLGK 245
             A    PP    ++ KVVL+GD  CGK+SLL  +   +F E Y PTVF+    ++   +   + ++IWDT+G  +YD +RPL + +A+V ++CFD+T   + +NI  +W PE+       PII+VGCK+DL  D+ L N  +R     V   +G  +A+ +GA+AY ECS+++ D    ++++F+ AA  +  S G+
Sbjct:    6 AAGEEAPPGV--RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV-KGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHD---NVHAVFQEAAEVALSSRGR 196
The following BLAST results are available for this feature:
BLAST of TCONS_00069649-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHOD4.489e-4336.55Rho-related GTP-binding protein RhoD OS=Homo sapie... [more]
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