TCONS_00069344-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069344-protein
Unique NameTCONS_00069344-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1029

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069344-protein ID=TCONS_00069344-protein|Name=TCONS_00069344-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1029bp
MDAIKNAINKIQTFTNKQNDNLLFHKLKADGLGNVTPRDYQLYGIEWLTH
SWLQRQDGGVILGDEMGLGKTLQSVAFSLHLVETHQVEQPILILAPLSVI
DGWKQEFARSAPSLKVIIHIGDKDSREERRQSISDHFKFNNWTSEKPPFN
VLVTSYEICLKDHTFLEKFKWSMLIVDEAHRLKNAESLLYQTLKTLDMGF
KILLTGTPVQNNLKELYSLLSFTSPDIFSIENSEDFVEYFSTISEENSKL
KKDLHKMLKPFLLRRTKNEVVLDLPGKSEVVLYTGMTKEQKKLYKTILTK
DIGAFNQETGQKTRLLNVLMQLRKCCNHPYIFPGVEPEPFELGEHLIETS
GKLVILDKLLKFLKKGGHKVLIFSQMTTMLDIVQDYLGYREYTYERLDGS
VRGEERFLAVNNFNATSDTFIFLLSTRAGGQGLNLMTADTVIFLDNDFNP
QNDLQAAARAHRIGQTRPVKIIRLVSKNTVEEIILKRAEQKLKLTNSVVE
GGQFSSVKADEVPIELNNILKFGLDDLFNQDCDEENKVDLEKLVGKTSKG
CWSTTKEGDGVAKQTNVQENEQENMYVYEGQDYSNIASEQDKNTFENFVK
NVTDAIDTERSLRKNPKPTVQPLFDLPARKRKTLTEDEKRELKAKREENK
AKRIKLMEEKRADKLKKLRESHNYESCRIELPDNDSDDNESLSSETEDSS
VATENEDDRQISYVVGDLMQPKNLKNRDRIICHCVDNSGVWGRGGLFTAM
EKVSSVPRTQYEIASKVKDLETGDVHLIKFKEATKTDPSIYVALIVAHTR
DRNNRLSPILMSSLSEALQKLYHVAETTGASIHFPRIGYNTPKFNWYGTE
KLIKKMLAQRGIKTLVYYYRRRGHNNKPSTSASSQQQATTTSTIASERTD
PSEQSISTLSDTSSKETSPTAENNSLESNADLAEIFQNCTMFFHHFKDSA
ELKKLSRYVIAYDGDVDKTMTSYTTHIITSGDVIDSNDLKNYKETGLPVV
SKDWISECVRKGNLVDVKNFVVDLSSSES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043215XLOC_043215Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069344TCONS_00069344Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001357BRCT_dom
IPR001650Helicase_C
IPR031916LIG3_BRCT
IPR000330SNF2_N
IPR002464DNA/RNA_helicase_DEAH_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 632..662
NoneNo IPR availableGENE3D3.40.50.10810coord: 3..271
e-value: 3.5E-52
score: 176.4
NoneNo IPR availableGENE3D3.40.50.300coord: 342..502
e-value: 1.0E-33
score: 115.5
NoneNo IPR availableGENE3D3.40.220.10coord: 706..869
e-value: 1.1E-15
score: 57.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 609..655
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 876..926
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..707
NoneNo IPR availableCDDcd00046DEXDccoord: 59..208
e-value: 1.39937E-20
score: 88.9336
NoneNo IPR availableCDDcd00079HELICccoord: 367..472
e-value: 3.457E-22
score: 93.4564
NoneNo IPR availableSUPERFAMILY52949Macro domain-likecoord: 711..868
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 33..240
e-value: 4.0E-36
score: 136.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 51..226
score: 21.367
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 933..1012
e-value: 5.2E-10
score: 49.3
IPR001357BRCT domainGENE3D3.40.50.10190coord: 930..1029
e-value: 7.4E-16
score: 57.6
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 931..1022
score: 20.295
IPR001357BRCT domainCDDcd00027BRCTcoord: 938..1010
e-value: 1.38266E-8
score: 51.9387
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 935..1023
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 381..464
e-value: 2.1E-17
score: 73.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 356..464
e-value: 5.0E-17
score: 62.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 355..520
score: 18.227
IPR031916DNA ligase 3, BRCT domainPFAMPF16759LIG3_BRCTcoord: 932..1013
e-value: 1.1E-12
score: 48.0
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 55..331
e-value: 3.9E-57
score: 193.4
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 172..181
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 21..265
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 266..508

Blast
[Close]
BLAST of TCONS_00069344-protein vs. Swiss-Prot (Human)
Match: CHD1L (Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens GN=CHD1L PE=1 SV=2)

HSP 1 Score: 798.89 bits (2062), Expect = 0.000e+0
Identity = 418/863 (48.44%), Postives = 572/863 (66.28%), Query Frame = 0 
Query:   27 LKADGLGNVTPRDYQLYGIEWLTHSWLQRQDGGVILGDEMGLGKTLQSVAFSLHLVETHQVEQPILILAPLSVIDGWKQEFARSAPSLKVIIHIGDKDSREERRQSISDHFKFNNWTSEKPPFNVLVTSYEICLKDHTFLEKFKWSMLIVDEAHRLKNAESLLYQTLKTLDMGFKILLTGTPVQNNLKELYSLLSFTSPDIFSIENSEDFVEYFSTISEENSKLKKDLHKMLKPFLLRRTKNEVVLDLPGKSEVVLYTGMTKEQKKLYKTILTKDIGAFNQETGQKTRLLNVLMQLRKCCNHPYIFPGVEPEPFELGEHLIETSGKLVILDKLLKFLKKGGHKVLIFSQMTTMLDIVQDYLGYREYTYERLDGSVRGEERFLAVNNFNATSDTFIFLLSTRAGGQGLNLMTADTVIFLDNDFNPQNDLQAAARAHRIGQTRPVKIIRLVSKNTVEEIILKRAEQKLKLTNSVVEGGQF---SSVKADEVPIELNNILKFGLDDLFNQDCDEENKVDLEKLVGKTSKGCWSTTK--EGDGVAKQTNVQENEQENMYVYEGQDYSNIASEQDKNTFENFV---KNVTDAIDTE-RSLRKNPKPTVQPLFDLPARKRKTLTEDEKRELKAKREENKAKRIKLMEEKR-----ADKLKKLR--ESHNYES-CRIELPDNDSDDNESLSSETEDSSVATENEDDRQISYVVGDLMQPKNLKNRDRIICHCVDNSGVWGRGGLFTAMEKVSSVPRTQYEIASKVKDLETGDVHLIKFKEA-TKTDPSIYVALIVAHTRDRNNRLSPILMSSLSEALQKLYHVAETTGASIHFPRIGYNTPKFNWYGTEKLIKKMLAQRGIKTLVYYYRR 871
            L+  GL  +  R YQL G+ WL   +      G ILGDEMGLGKT Q++A  ++L      E P LIL PLSV+  WK+E  R AP L  + + GDK+ R   +Q +           ++  F+VL+T+YEICLKD +FL+ F WS+L+VDEAHRLKN  SLL++TL    + F +LLTGTP+QN+L+ELYSLLSF  PD+FS E   DF++ +  I E+ S+   +LHK+L+PFLLRR K EV  +LP K+EVV+Y GM+  QKK YK IL KD+ AF  ET +K +L N+L QLRKC +HPY+F GVEPEPFE+G+HL E SGKL +LDKLL FL  GGH+VL+FSQMT MLDI+QDY+ YR Y+YER+DGSVRGEER LA+ NF      F+FLLSTRAGG G+NL  ADTVIF+D+DFNPQNDLQAAARAHRIGQ + VK+IRL+ ++TVEEI+ ++A  KL+LTN ++EGG F   +   A +  ++L+ ILKFGLD L   +    +++DLE ++G+T  G W +      +G ++    QE  + +MY++EG+DYS   S++D+ +FE  V   K + +    E RSLR      +  L +   ++++ L+ +E  + + KR+E  AKR +L+EEK+     A+  KK+   ES+NY+S C   LP  +S+  +  + E   + +  ++ D   + YV GD+  P+     D +I HCVD+SG WGRGGLFTA+EK S+ PR  YE+A K+KDL  G V L    +  ++      +ALIVA  RDR+N LS I M++L E L+K++  A+   AS+H PRIG+ T  FNWYGTE+LI+K LA RGI T +YY+ R
Sbjct:   36 LRQWGLTGIHLRSYQLEGVNWLAQRF--HCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLK----------QESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDI-EKESESASELHKLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-GQQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWVSDALPAAEGGSRD---QEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFC---LPSEESEPEDLENGEESSAELDYQDPDATSLKYVSGDVTHPQA-GAEDALIVHCVDDSGHWGRGGLFTALEKRSAEPRKIYELAGKMKDLSLGGVLLFPVDDKESRNKGQDLLALIVAQHRDRSNVLSGIKMAALEEGLKKIFLAAKKKKASVHLPRIGHATKGFNWYGTERLIRKHLAARGIPTYIYYFPR 877
The following BLAST results are available for this feature:
BLAST of TCONS_00069344-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHD1L0.000e+048.44Chromodomain-helicase-DNA-binding protein 1-like O... [more]
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