TCONS_00069272-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069272-protein
Unique Name	TCONS_00069272-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	351

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069272-protein ID=TCONS_00069272-protein|Name=TCONS_00069272-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
MRFVSVRNLSLLAFILLLSWEAWKAVITTELRHRAIRRITEAFEASTKFD
EKLLTNEYLVTENSVDVEYAAVQRLRKKVLKTGCHQRKVEDIYPLNTDFN
KGINPSAFRNILVSDKHQLLYCITPKVACTNWKRVLLVLDGYFTDPNNIT
ASLAHDFNQGYFRRLSDYTPDEINLRLSTYYKFLFARHPFERLTAAYRNK
FIYQNTQNKFFSVIFGQFIRRKYRHHNSTTTKKSSVTFAEFVQYIVDSPL
EDKEFWNEHWERIERLCLPCLIQYDFIGKFETLKQDADFLLRTLDVNDLV
KFPDGYKGHASSTPSLMRNLFESLPKRLLEKLYELYKMDFMLFGYQNGFE
S

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043157	XLOC_043157	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069272	TCONS_00069272	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005331	Sulfotransferase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008146	sulfotransferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008146	sulfotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005331	Sulfotransferase	PFAM	PF03567	Sulfotransfer_2	coord: 110..346 e-value: 6.0E-51 score: 173.7

Blast

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BLAST of TCONS_00069272-protein vs. Swiss-Prot (Human)
Match: CHSTD (Carbohydrate sulfotransferase 13 OS=Homo sapiens GN=CHST13 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.240e-60
Identity = 117/282 (41.49%), Postives = 152/282 (53.90%), Query Frame = 0

Query:   70 AAVQRLRKKVLKTGC--HQRKVEDIYPLNTDFNKGINPSAFRNILVSDKHQLLYCITPKVACTNWKRVLLVLDGYF-TDPNNITASLAHDFNQGYFRRLSDYTPDEINLRLSTYYKFLFARHPFERLTAAYRNKFIYQNTQNKFFSVIFGQFI--RRKYRHHNSTTTKKSSVTFAEFVQYIVDSPLEDKEFWNEHWERIERLCLPCLIQYDFIGKFETLKQDADFLLRTLDVNDLV-KFPDGYKGHASSTPSLMRNLFESLPKRLLEKLYELYKMDFMLFGY 345
            A V R R+ +L + C  H R+            + + P   R++LV D H LLYC  PKVACTNWKRVLL L G    DP  I+A  AH    G    L+D++P EIN RL  Y  FLF R PFERL +AYRNK       +  F   +G  I  R + R       +   V FAEF+ Y++D     +E +NEHWER   LC PC ++YD +GKFETL +DA F+L     +DL    P   +G A+S   L   LF  +      +L++LYKMDF+LF Y
Sbjct:   67 AKVHRQRRDLLNSACSRHSRR-----------QRLLQPEDLRHVLVDDAHGLLYCYVPKVACTNWKRVLLALSGQARGDPRAISAQEAH--APGRLPSLADFSPAEINRRLRAYLAFLFVREPFERLASAYRNKLA--RPYSAAFQRRYGARIVQRLRPRALPDARARGHDVRFAEFLAYLLDPRTRREEPFNEHWERAHALCHPCRLRYDVVGKFETLAEDAAFVLGLAGASDLSFPGPPRPRGAAASR-DLAARLFRDISPFYQRRLFDLYKMDFLLFNY 332

The following BLAST results are available for this feature:

BLAST of TCONS_00069272-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069272-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CHSTD	1.240e-60	41.49	Carbohydrate sulfotransferase 13 OS=Homo sapiens G...	[more]

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TCONS_00069272-protein (polypeptide) - C. hemisphaerica