TCONS_00068809-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068809-protein
Unique NameTCONS_00068809-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length233

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068809-protein ID=TCONS_00068809-protein|Name=TCONS_00068809-protein|organism=Clytia hemisphaerica|type=polypeptide|length=233bp
MDILPAEIWIHFILTNLSIIDICKLQTVSKQSFSLVKSYMKSMKCLYFDE
EIALMLNEEGLKSIFASLKFIEQISLSLCWKSATETNLLLLTSNCSRIHF
FEAGHSSNITDNVLLNLAENCPKLEFLNIGSCYNVTDTGVLAIAKFSCNL
KHLIISSNYGITSKGLSALLKQCTNLETLDIGRTYLSNTSFDDMLREGYA
KNLKEIRLYKCPNISEGIMERLAAKGIMINSCF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042904XLOC_042904Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068809TCONS_00068809Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR001611Leu-rich_rpt
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 121..146
e-value: 4.5E-6
score: 36.2
coord: 147..172
e-value: 76.0
score: 7.7
coord: 173..197
e-value: 470.0
score: 1.5
coord: 95..120
e-value: 180.0
score: 4.8
coord: 200..225
e-value: 29.0
score: 10.9
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 147..169
e-value: 0.09
score: 12.8
coord: 120..144
e-value: 0.29
score: 11.2
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 1..225
e-value: 8.2E-25
score: 86.7
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 14..216

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068809-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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