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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00068735-protein ID=TCONS_00068735-protein|Name=TCONS_00068735-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1326bp
MLKWSLGSIGTPSTSSISTNYFSDSDASNITITSRSSRRRGSSRRSSIAS
SKNGSRHSGYASDFTNITDLSDFSEVEMSSCAYDDVFVKDKGDSILDMSP
YLDSSFTLQNFEVCFSLKKALNEIRIWIEYVTKYYAPREDGILKWLKDGC
VLRLFAARLSGHPQNRLKRLKPGKSNARNIYRFLKTCKKLGLHDDQLFEL
KDWNFITRSHRKTRAKQVEWVYRAKKVVSTISWLALVLKNHSKYAEKFIP
PNFKFRYFKNIVDTNLCMKQTISSSLSRLSHNNTLSPSTPSTSILYDSDA
SSRTKRKKVTFQENVQQHLCLVENKSKPYFNTHKDAPPKYQEFMEMKKSS
STELRSKGGGGSVPNISKTTSDKITRRQLDSNNNNNTLPRSVKLNPAKEK
IIPDLIILPSPKSPAPTTPDDGYLTGGQKGGTPYSPHSFITSQQESSNKN
KFFKGSKRFTLSSQKSSRKNSKNSPSQIKKALKAVETSPKVSSKPPSVVE
VPVELPKKETHTKQDDRNKMDTLTREEISDLNDLLSMFDEKDSPRGGAGS
PVQQPPTNYFKSKTLERKSKLKTPAQKSVEDIPVAEPISDTTEKPSKSNI
PRTQSQNYGRRTEEQGEASVPRRPMGRSQTMTRAARGAYTKSLDRERAKK
ETKKTDDLDFLQDVVSELLAVGKVEGPVIDTKPNQRTKSDSIDYPTRIPR
SVSSIDNFFDDIKLQTDSYSKNLDVEEDESTLSEGENDIFSTEGNDSGIE
DETMPGITKESSHKRRSSSKHRKHHDDGEENRSSKRDKDRVKRSESDSKK
SKKHRKHESDSKTNSLPRSEKHKTKSNGDVTVRIDGFDYNSDTIGRHGRP
KERRSEPPLPTKPPVDQKVKHKSRKSEPTLSHHHKSRHQNDLNGGQIGHQ
ERSMSDSHRHDRSKSPDKKDRSKSPSKNTTINVRSGDHRRPEGAENHRNH
KSKEHKWDHPSNGRHHVYSQPKNEDPGPLPKKDKFRDFDNNIRSMVRGKD
NDPDLVEKLGVTPDILKLLREEEKFWQRQQELKEWRQAKDSTYERPPPPS
NYQSRSNYAPKAPVSSTNQSAERDAEILREAAENRLALQAEKLMKVRAEQ
EHILRQSRENLLDEPDIARPPPPRNYKSSARSSSSGHSHSQTTNTRSFPT
TPTSPAREHAYPSYPQYANLPHTQPEPPPVNRTNKHSHHEVDQRPKGAPS
LGTAFSDDDDVFNETRKQATMDYRGYFSDDGFRDNTLSKTYLARPMFRQP
NQTLRCAHCSNLIKENRVMFVDSQNYYWHQSCFRCVVCQALLNDSNAIRV
RMVGSKLHCRFCTTARDEDHTLMSEV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1079..1099 |
| None | No IPR available | GENE3D | 2.10.110.10 | | coord: 1251..1319
e-value: 6.3E-9
score: 35.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 278..299 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 678..697 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1106..1209 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 33..58 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1034..1078 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 345..656 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 717..1007 |
| None | No IPR available | CDD | cd08368 | LIM | coord: 1256..1312
e-value: 3.13311E-8
score: 51.1643 |
| IPR001781 | Zinc finger, LIM-type | SMART | SM00132 | lim_4 | coord: 1255..1312
e-value: 4.0E-7
score: 39.7 |
| IPR001781 | Zinc finger, LIM-type | PFAM | PF00412 | LIM | coord: 1256..1312
e-value: 3.7E-7
score: 30.2 |
| IPR001781 | Zinc finger, LIM-type | PROSITE | PS00478 | LIM_DOMAIN_1 | coord: 1256..1292 |
| IPR001781 | Zinc finger, LIM-type | PROSITE | PS50023 | LIM_DOMAIN_2 | coord: 1254..1319
score: 11.573 |
| IPR001715 | Calponin homology domain | GENE3D | 1.10.418.10 | | coord: 116..491
e-value: 7.5E-8
score: 31.6 |
| IPR001715 | Calponin homology domain | SUPERFAMILY | 47576 | Calponin-homology domain, CH-domain | coord: 120..202 |
Blast
The following BLAST results are available for this feature:
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