TCONS_00068379-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068379-protein
Unique NameTCONS_00068379-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length167

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068379-protein ID=TCONS_00068379-protein|Name=TCONS_00068379-protein|organism=Clytia hemisphaerica|type=polypeptide|length=167bp
DASSDINLLQSQIQKLQTEVANEKAEIKELKSRVQTRNGICQINSNRCGS
CLCVEDYSLVNDXKYSPHSFSPVKYFCDCREKPVRRDCKEHYDKGERING
LYRVSMNVIGHVVQVSCVQTLNRGGWTVFQRRFDGSENFYRSWQEYKHGF
GKLEGEHWLGNENLYRL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042671XLOC_042671Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068379TCONS_00068379Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..33
NoneNo IPR availableGENE3D1.10.287.540coord: 3..41
e-value: 2.1E-5
score: 23.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 83..167
e-value: 5.7E-4
score: -85.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 85..166
e-value: 3.9E-25
score: 88.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 79..167
score: 27.399
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 82..167
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 79..167
e-value: 6.6E-31
score: 106.6

Blast
[Close]
BLAST of TCONS_00068379-protein vs. Swiss-Prot (Human)
Match: FGL2 (Fibroleukin OS=Homo sapiens GN=FGL2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.686e-22
Identity = 59/169 (34.91%), Postives = 88/169 (52.07%), Query Frame = 0 
Query:    9 LQSQIQKLQTEVANEKAEIKELKSRVQTRNGICQINSNRCGSCLCVEDY--SLVNDXKYSPHSFSPVKYFCDCRE----KPVR----RDCKEHYDKGERINGLYRVSMNVIGHVVQVSCVQTLNRGGWTVFQRRFDGSENFYRSWQEYKHGFGKLEGEHWLGNENLYRL 167
            L+S++ KL +E+ N K EI  L  R++  N +   N         +E+Y  S V +  +  +S       C  +E    +PV+    +DC ++Y  G+R +  YRV+ +      +V C      GGWTV Q R DGS NF R+WQ+YK GFG L  E WLGN+ ++ L
Sbjct:  133 LESEVNKLSSELKNAKEEINVLHGRLEKLNLVNMNN---------IENYVDSKVANLTFVVNSLDGKCSKCPSQEQIQSRPVQHLIYKDCSDYYAIGKRSSETYRVTPDPKNSSFEVYCDMETMGGGWTVLQARLDGSTNFTRTWQDYKAGFGNLRREFWLGNDKIHLL 292
The following BLAST results are available for this feature:
BLAST of TCONS_00068379-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGL21.686e-2234.91Fibroleukin OS=Homo sapiens GN=FGL2 PE=1 SV=1[more]
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