TCONS_00068210-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068210-protein
Unique NameTCONS_00068210-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length331

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068210-protein ID=TCONS_00068210-protein|Name=TCONS_00068210-protein|organism=Clytia hemisphaerica|type=polypeptide|length=331bp
MFSARIQMDMYKILICTLMISLIINGTLAQEMQLNSHFRLEKENYTIKNG
SHIPSEEFVIKGSEIECLLKCQLNYLVCFTLQILKLGSASWLCRFYDVDF
MKLSYESKEGSMVYSTTARSCLEWLERGFTLDGVYKILPVGEEKEVYCDM
TGGGWTMIQRRLNGDIDFNRGWQSYKEGFGDVNGDFWIGLETIREMSVLL
NNTLIRIQGESFNEDRRFIIAKGFYIEDEQKKYKLHAGTMINDEWDIGHD
WTYHGGSMFTTRDDDNDKKGGSNCAQKYPCAWWYVNCYALNANRAPAKQQ
QTTYADGISWPAWLGDFQSLKTINMAIKKMN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042579XLOC_042579Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068210TCONS_00068210Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 116..330
e-value: 4.6E-49
score: 179.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 118..328
e-value: 1.1E-48
score: 165.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 112..331
score: 40.839
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 119..330
e-value: 2.178E-64
score: 204.011
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 113..328
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 260..321
e-value: 2.7E-16
score: 59.0
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 29..259
e-value: 4.0E-46
score: 156.9

Blast
[Close]
BLAST of TCONS_00068210-protein vs. Swiss-Prot (Human)
Match: FCN1 (Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 1.064e-40
Identity = 83/222 (37.39%), Postives = 122/222 (54.95%), Query Frame = 0 
Query:  111 SMVYSTTARSCLEWLERGFTLDGVYKI-LPVGEEKEVYCDMT--GGGWTMIQRRLNGDIDFNRGWQSYKEGFGDVNGDFWIGLETIREMSVLLNNTLIRIQGESFNEDRRFIIAKGFYIEDEQKKYKLHAGTMINDEWDIGHDWTYHGGSMFTTRDDDNDKKGGSNCAQKYPCAWWYVNCYALNANRAPAKQQQTTYADGISWPAWLGDFQSLKTINMAIKK 329
            S   +T  R+C + L+RG+ L G + I LP      V CDM   GGGWT+ QRR++G +DF R W +YK+GFG   G+FW+G + I  ++    ++ +R+    F  + +F   K F + DE +KYKL  G  +      G+  T H  + F+T+D DND    SNCA+K+  AWWY +C+A N N         +YA+GI+W A  G   S K   M ++ 
Sbjct:  108 SQSCATGPRNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTA-QGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFVGGS--AGNSLTGHNNNFFSTKDQDNDVS-SSNCAEKFQGAWWYADCHASNLNGLYLMGPHESYANGINWSAAKGYKYSYKVSEMKVRP 325
The following BLAST results are available for this feature:
BLAST of TCONS_00068210-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN11.064e-4037.39Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2[more]
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