TCONS_00067484-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067484-protein
Unique NameTCONS_00067484-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length528

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067484-protein ID=TCONS_00067484-protein|Name=TCONS_00067484-protein|organism=Clytia hemisphaerica|type=polypeptide|length=528bp
LTSVHSQAENNFLKQEFHNRTGRRIAWYGGEKKNGVFIWSDGTSFTKTFW
KSGEPNNLNGNENCLLTNDGAWNDEDCSVTKYYVCKLDSEFTLRFLTKPS
VRKSESGNEVIISGCSYSSSTHSSWMAKSFIQRNNDDLIAIFNATQVTDE
TKDENVFTLPSVKLSNVEGGDFSCVVVIDNMTFFSNTTKFIPENQVTSFN
EAQYYFSISKKNWQSAENDCIYLGGHLTSVHSQAENEFINQEIKRTTGNV
IVWYGGERKNNVFVWTDGTIFTKTFWNTGEPNNLGGNENCLNVYATGMWN
DISCHNLFYYVCKLRSSDFTLQFLTKPSLRRSESRKETIVSGCSYSSSTH
SSWMAKSFIQRNNDDLIAISTAVQVTNETSRDNVFTLPSVKLSYIEHGDF
RCVIIHDSITYYSFASKLYKSPDFIDVPTFARESQHLLSGCNFLYHEAPQ
TDNVFFNLYNDAKQLTNRRRTTFKNSTIPNQYHFNXCKTIDKQKTHNHQK
LHNSKPVSFQPSYSYQLYRCGKLHSMSN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042146XLOC_042146Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067484TCONS_00067484Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR018378C-type_lectin_CS
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 191..313
e-value: 4.9E-26
score: 102.5
coord: 1..86
e-value: 0.041
score: 19.0
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 210..313
e-value: 7.9E-19
score: 68.3
coord: 1..86
e-value: 3.9E-11
score: 43.5
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 199..313
score: 23.514
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 1..86
score: 18.906
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 1..93
e-value: 6.9E-23
score: 80.7
coord: 114..321
e-value: 4.3E-35
score: 120.5
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 64..85
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 290..312
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 1..91
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 185..316

Blast
[Close]
BLAST of TCONS_00067484-protein vs. Swiss-Prot (Human)
Match: CLC4K (C-type lectin domain family 4 member K OS=Homo sapiens GN=CD207 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 4.853e-20
Identity = 49/118 (41.53%), Postives = 63/118 (53.39%), Query Frame = 0 
Query:  204 YYFSISKKNWQSAENDCIYLGGHLTSVHSQAENEFINQEIKRTTGNVIVWYGGERKN--NVFVWTDGTIFTKT----FWNTGEPNNLGGNENCLNVYATGM--WNDISCHNLFYYVCK 313
            YYFS+  K W SAE  C+    HLTSV S++E EF+     +T G +I W G  +      + W D T F K     FW  GEPNN G NE+C N+ A  +  WND  C   F ++CK
Sbjct:  207 YYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLY----KTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICK 320
The following BLAST results are available for this feature:
BLAST of TCONS_00067484-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLC4K4.853e-2041.53C-type lectin domain family 4 member K OS=Homo sap... [more]
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