TCONS_00067375-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067375-protein
Unique NameTCONS_00067375-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length633

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067375-protein ID=TCONS_00067375-protein|Name=TCONS_00067375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=633bp
MSDFSGGRNFHHHNSDNRMHNNYRKDLYQEHYGYSFKQNRIMTVETMKTL
DLLADREHEKSHREVIIYDSGSPVLKVETGTTLKVLKLLYGAEHERKRQI
LGVRPKNIGEGGIPCIVTLDDSKLFEISYDILISEDGKEKKETTGEDGNT
TNRCIDCSRESWKTKRFTNVGMNTELSLNPGVEVDMSKLNNNSNQQSPNS
QAANHDKGAFPPNNGPTVTQHSPSAINPRGGSFLQPKEMHGKPPSRTNGN
HHEEAERPPHERPGVTSPTYGVEIYSNHRSSQIRYPSLEPPAHYERFVQP
HGWMIERGGRYDPTRPHHENPTLASRRSPGHRSRSPISPRAGEYHPHSHY
HAFHEKYRPVLLPTNYMHGSRRRESRHTPAEEKTEPTYIKKENAKEQIQP
LTHASEQNDKMGRANLQPGDEPPVFVLPNDYDVVSGIDPRIASMQDKRSG
KFSPLSPSHEKEDEKPLKASNIENGEKDLKEEFQNSPSESTGSYSPKGSN
GVASGSPDSPPTNSSQKLYCKICSGVFPTKSLLYKHLRGHTSDEKPFKCN
ECGQGFTLSSNLRQHRIIHRGYKPFQCEFCGKKFMRSNVYKQHRRIHTGE
EMHKCGLCPSEFLQKYALLKHMKKNHDIDAVDA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042093XLOC_042093Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067375TCONS_00067375Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 603..626
e-value: 0.054
score: 22.6
coord: 575..597
e-value: 0.0049
score: 26.1
coord: 518..540
e-value: 0.19
score: 20.8
coord: 547..569
e-value: 0.011
score: 25.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 520..540
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 549..569
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 605..626
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 577..597
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 575..602
score: 14.461
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 518..545
score: 10.388
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 603..626
score: 8.538
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 547..574
score: 15.147
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 569..621
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 526..584
NoneNo IPR availableGENE3D3.30.160.60coord: 568..587
e-value: 2.4E-14
score: 52.6
NoneNo IPR availableGENE3D3.30.160.60coord: 553..567
e-value: 2.4E-13
score: 49.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 547..569
e-value: 6.4E-4
score: 19.9
coord: 519..540
e-value: 0.0026
score: 18.0
NoneNo IPR availableGENE3D2.30.30.380coord: 531..552
e-value: 3.8E-9
score: 36.1
NoneNo IPR availableGENE3D3.30.160.60coord: 459..530
e-value: 0.015
score: 14.8
NoneNo IPR availableGENE3D3.30.160.60coord: 588..631
e-value: 1.5E-14
score: 53.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..513

Blast
[Close]
BLAST of TCONS_00067375-protein vs. Swiss-Prot (Human)
Match: ZSC31 (Zinc finger and SCAN domain-containing protein 31 OS=Homo sapiens GN=ZSCAN31 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.851e-23
Identity = 46/104 (44.23%), Postives = 68/104 (65.38%), Query Frame = 0 
Query:  520 CKICSGVFPTKSLLYKHLRGHTSDEKPFKCNECGQGFTLSSNLRQHRIIHRGYKPFQCEFCGKKFMRSNVYKQHRRIHTGEEMHKCGLCPSEFLQKYALLKHMK 623
            C+ C   F  +S L +H R HT  EKP++C ECG+ F+ S+ L +HR IH G KP++C+ CGK F+ S+   QH+RIHTGE+ ++C  C   F+Q   L +H++
Sbjct:  269 CEECGKAFSRRSSLNEHRRSHTG-EKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLR 371

HSP 2 Score: 96.2857 bits (238), Expect = 2.712e-21
Identity = 47/104 (45.19%), Postives = 65/104 (62.50%), Query Frame = 0 
Query:  520 CKICSGVFPTKSLLYKHLRGHTSDEKPFKCNECGQGFTLSSNLRQHRIIHRGYKPFQCEFCGKKFMRSNVYKQHRRIHTGEEMHKCGLCPSEFLQKYALLKHMK 623
            C  C   F   S+L +H R HT  EKP++C ECG+ F+  S+L +HR  H G KP+QC+ CGK F  SN   +HRRIHTGE+ ++C +C   FL    L++H +
Sbjct:  241 CNECGKSFTKSSVLIEHQRIHTG-EKPYECEECGKAFSRRSSLNEHRRSHTGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQHQR 343

HSP 3 Score: 89.3521 bits (220), Expect = 4.858e-19
Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 0 
Query:  520 CKICSGVFPTKSLLYKHLRGHTSDEKPFKCNECGQGFTLSSNLRQHRIIHRGYKPFQCEFCGKKFMRSNVYKQHRRIHTGEEMHKCGLCPSEFLQKYALLKHMK 623
            CK C   F   + L +H R HT  EKP++C  CG+ F LSS L QH+ IH G K +QC  CGK F+++    QH R+HTGE+ ++C  C   F ++  L KH K
Sbjct:  297 CKECGKAFSASNGLTRHRRIHTG-EKPYECKVCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQK 399
The following BLAST results are available for this feature:
BLAST of TCONS_00067375-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZSC311.851e-2344.23Zinc finger and SCAN domain-containing protein 31 ... [more]
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