TCONS_00067342-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067342-protein
Unique Name	TCONS_00067342-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1301

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067342-protein ID=TCONS_00067342-protein|Name=TCONS_00067342-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1301bp
MKGILRSIEDDVNFEISQTVTKIGKENCDINIISPQVELRQAVLEYDHQY
HCFFIEDLNTFHGTYVNECRVQNSKVKLNHGDIIRFGHGGPRFEILTEIQ
TNPSVVRQHVWEDGAVNFPYLPFHSTTTASTIPTSNPYQQSFGRQSVPHP
PTVRQRPVSANPSNGVFLQTRPLSGALTKDFSTTSKPSDQVLNLEEQVTQ
MTGEISRLEMVQRDRDTFQESVVINLKKQLSGLESEKSTIVDDTSRRLSI
LQNQITMKNDEIDHLQAENRKLKSVRFDGSVSQTNKIAELQTLLTRHDQN
ISSMQLEMEKAGKEKSKLSNIITTLQKEISAKDLLLRKSKTETEKYRVEC
RNKDMDISSLTAKIQRQTLSDQAKKDLKKKDEELSSIRYRMKKADEKVSE
RELTILNLKEQIENANKSIANSERSMQLLEDENTRYRSKSLQLENTEQNH
RIQFENLKRKHDTFHQHVAELFSQHGYTFDRVLDDNDVLNYIKEIRNELD
KSSFRLEEILREKEQVESIIPSDHELESLRHLLYDIESRLLRNGRTCHHL
RQEVQRAQEISTCEQLQWIKSFVISMLSQESNWEQQIENALEAVKFQNNG
NNTEDPTTLIHRLQIKLKENFKQLEDLENQINSADDEHSQLYKNIKNKIK
EKYKKKMEEKIEEIKEHERNKFEKLRQDEIDRLSLELKIKEQELKNILRT
QDYENNQIHQLKKRMEKQESEILEGQLETQKLKCELEESKQTEALYKKKM
DDKEDEIYLQKQIMERKIENFQNAEISLLKDKSDTQSMTISSLENTLLEI
NKEKKDSDLKFMKMKNVLKEHKKELLLKKDEEKKSYAFLKKEINELKDLN
KTLRRSFHESQKECEEQKDLVKSLKRDMNGMSIRMTDMKGELSEEEKMKT
EELREQLSKQELAHLEQRKQLIQLSNLVDEQQKKLKEQERMLQVKNETLA
FQADGLKEQTHNHERQVAMVRPAHRNTKKIAERCLEEKHDDVILRQKQAI
ADMRSSLKEGTYQKPQSALEEMALQELNVLKKENVDLKEQLVMTGNWCQT
TDKDLYNEVCKSRDILRTAFHDYGIEKMTHQDTQQALSVNEELFLHTLQS
ISTELGIKHILGGSPMCYNDVEGRKELMKHREKALENILNRIKTLQERLK
NKDKILEDYDEDLKKLRLVEQQTGKVSAENEAIKKEMLMTREENTFLQEA
LRKNKTDLENEKRMRKSIKQKKIHYMDFQDDEEKTKKKHDCYEDEIKKYK
EERKEKNKDDLLKKKNFQIALLKQELQHSNRVLNGVTDDVALTEKMKDLE
M

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042083	XLOC_042083	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067342	TCONS_00067342	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000253	FHA_dom
IPR008984	SMAD_FHA_domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 921..948
None	No IPR available	COILS	Coil	Coil	coord: 822..877
None	No IPR available	COILS	Coil	Coil	coord: 893..918
None	No IPR available	COILS	Coil	Coil	coord: 248..275
None	No IPR available	COILS	Coil	Coil	coord: 492..512
None	No IPR available	COILS	Coil	Coil	coord: 610..644
None	No IPR available	COILS	Coil	Coil	coord: 287..328
None	No IPR available	COILS	Coil	Coil	coord: 680..728
None	No IPR available	COILS	Coil	Coil	coord: 391..449
None	No IPR available	COILS	Coil	Coil	coord: 1128..1162
None	No IPR available	COILS	Coil	Coil	coord: 1232..1259
None	No IPR available	COILS	Coil	Coil	coord: 1020..1040
None	No IPR available	COILS	Coil	Coil	coord: 647..678
None	No IPR available	COILS	Coil	Coil	coord: 736..756
None	No IPR available	COILS	Coil	Coil	coord: 191..211
None	No IPR available	GENE3D	2.60.200.20		coord: 4..111 e-value: 6.3E-18 score: 64.5
None	No IPR available	GENE3D	1.20.1170.10		coord: 126..476 e-value: 1.4E-5 score: 23.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..164
None	No IPR available	CDD	cd00060	FHA	coord: 17..95 e-value: 7.75112E-11 score: 59.7074
IPR000253	Forkhead-associated (FHA) domain	PFAM	PF00498	FHA	coord: 22..87 e-value: 1.3E-11 score: 44.6
IPR000253	Forkhead-associated (FHA) domain	PROSITE	PS50006	FHA_DOMAIN	coord: 14..71 score: 8.496
IPR008984	SMAD/FHA domain	SUPERFAMILY	49879	SMAD/FHA domain	coord: 13..103

Blast

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BLAST of TCONS_00067342-protein vs. Swiss-Prot (Human)
Match: FHAD1 (Forkhead-associated domain-containing protein 1 OS=Homo sapiens GN=FHAD1 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 2.214e-26
Identity = 109/410 (26.59%), Postives = 193/410 (47.07%), Query Frame = 0

Query:    1 MKGILRSIEDDVNFEISQTVTKIGK-ENCDINIISPQVELRQAVLEYDHQYHCFFIEDLNTFHGTYVNECRVQNSKVKLNHGDIIRFGHGGPRFEILTEIQTNPSVVRQHVWEDG-----------AVNFP-------YLPFHSTTTASTIPTSNPYQQSFGRQSVPHPPTVRQRPVSANPSNGVFLQTRPLSGALTKDFSTTS----------------KPSDQVLNLEEQVTQ---------MTGEISRLEMVQRDRDTFQESVVINLKKQLSGLESEKSTIVDDTSRRLSILQN--QITMKNDEIDH-LQAENRKLKSVRFDGSVSQTNKIAELQTLLTRHDQNISSMQLEMEKAGKEKSKLSNIITTLQKEISAKDLLLRKSKTETEKYRVECRNKDMDISSLTAK 363
            MK  L+S E    F +    T IG+ EN D+ + SP ++   A++EY+     F ++D N+ +GT+VNEC +QN  VKL  GDI+RFG  G  +E++ E   NP  V    W  G           A   P       ++PFH     +  P    + Q+F R +V  P + R RPVSAN     F+        + K   T +                 P++  + +EE + Q         +  E+SRL   + +   +++ ++ NL+ +++ L  + S     TSR     QN  +I+ K   +D  + A+ ++++S++   S  Q      L   L+  +  I+S++ E E   ++ +  S ++++LQK+I AKD  +++ K E    + + ++KD  + +L ++
Sbjct:    1 MKAYLKSAE---GFFVLNKSTTIGRHENSDLVLQSPDIDNHHALIEYNEAECSFVLQDFNSRNGTFVNECHIQNVAVKLIPGDILRFGSAGLTYELVIE---NPPPV-SFPWMRGPAPWPGPQPPRATQQPNQAPPPSHIPFHQGVQPA--PMQRSWSQAFPRPTVVLPASHR-RPVSANKEMFSFVVDDARKPPVIKQVWTNAMKLSEKSVAEGIPGAVPPAE--IYVEEDLAQQDKDEIILLLGKEVSRLSDYEIE-SKYKDVIIANLQNEVAELSQKVSETT--TSR-----QNEKEISQKCQVLDEDIDAKQKEIQSLKSQISALQKGYSKVLCQTLSERNSEITSLKNEGENLKRDNAITSGMVSSLQKDILAKDEQVQQLKEEVSHLKSQNKDKDHQLEALGSR 390

HSP 2 Score: 102.834 bits (255), Expect = 6.993e-22
Identity = 106/393 (26.97%), Postives = 207/393 (52.67%), Query Frame = 0

Query:  860 SQKECEEQKDLVKSLKRDMNGMSIRMTDMKGELSEEEKMKTEE---LREQLSKQELAHLEQRKQLIQLSNLVDEQQKKLKEQERMLQVKNETLAFQADGLKEQTHNHERQVA----MVRPAHRNTKK----------IAERCLEEKHDDVILRQKQAIADMRSSLKE-GTYQKP-------QSALEEMALQELNVLKKENVDLKEQLVMTGNWCQTTDKDLYNEVCKSRDILRTAFHDYGIEKMTHQDTQQALSVNEELFLHTLQSISTELGIKHILGGSPMCYNDVEGRKELMKHREKALENILNRIKTLQERLKNKDKILEDYDEDLKKLR----LVEQQTGKVSAENEAIKKEMLMTREENTFLQEALRKNKTDLENEKRMRKSIKQKKI 1223
            +QKE   Q++++  L++D+     RM+D++GEL+E++KM+ E+   L +Q SK EL+ L+++  + Q+S+LV+++ ++LK  E  L+   E    Q +  KEQ    + Q       + P H               +  RC   +H++VI RQK+A++++R+ +KE    + P       +S L+   L+  N ++K  +D K  L                E+   ++ L  A     +EK    D  +AL ++E+L+L   +++ + + IK++ G   M Y   + R+++ + R++ L+ + ++I  L+ +L  K+++L  Y++D+++LR     +E    +V+   + I KE     EE   L+EAL + +  L  EKR+ ++I+Q+K+
Sbjct: 1000 AQKEILSQQEVIMKLRKDLTEAHSRMSDLRGELNEKQKMELEQNVVLVQQQSK-ELSVLKEK--MAQMSSLVEKKDRELKALEEALRASQEKHRLQLNTEKEQKPRKKTQTCDTSVQIEPVHTEAFSSSQEQQSFSDLGVRCKGSRHEEVIQRQKKALSELRARIKELEKARSPDHKDHQNESFLDLKNLRMENNVQKILLDAKPDLPTLSRI----------EILAPQNGLCNARFGSAMEKSGKMDVAEALELSEKLYLDMSKTLGSLMNIKNMSGHVSMKYLSRQEREKVNQLRQRDLDLVFDKITQLKNQLGRKEELLRGYEKDVEQLRRSKVSIEMYQSQVAKLEDDIYKEA----EEKALLKEALERMEHQLCQEKRINRAIRQQKV 1375

The following BLAST results are available for this feature:

BLAST of TCONS_00067342-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067342-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
FHAD1	2.214e-26	26.59	Forkhead-associated domain-containing protein 1 OS...	[more]

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TCONS_00067342-protein (polypeptide) - C. hemisphaerica

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