TCONS_00067339-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067339-protein
Unique Name	TCONS_00067339-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	512

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067339-protein ID=TCONS_00067339-protein|Name=TCONS_00067339-protein|organism=Clytia hemisphaerica|type=polypeptide|length=512bp
MNLALKLKGTQIKFRKMAQTNGHDASNGIVFGLMNQQGKYLTAEKFGNQI
SVTGTSLRSKQLWTFEPEGAESSKGYLRSPQKNYLETTKTGTVTCEAEEK
EVSLLFDVTVADDGRWAFKDSFGKFLAGNTERLYTTMDSKQADEYLWAIH
IAGHPQCNMRSVSRKRFVHLKDDQLCANEDIPWGHDAVITLEFHRGKYAI
RDSNGRYLNGESGELETTSTEECMFSIALQDTEFAFKSSSGKYLTVYGPA
GKLIANKKAISRDELFALEQSKAQVMLTANNGKTASIKQGIDVTANQFLE
LGDFGDTETFQMEFIDGQQNQVTFLSKNKKYWTAGNKSVTSSADQISPEC
IFELEYEGDKIALKAHNDRYITSTSGGKLVPTGETTSDANTLFLMQLMNR
PILVLRCEHGYVGLIDSNDKVQCSRGGYDAMLVEGDGQGRYRLKTSKGKS
WKVDGTSHLLQSSDEGDLFLFELCSKNKMRIQASNGKYLKGDHNGVITAS
AGKDDRNILWEY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042082	XLOC_042082	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067339	TCONS_00067339	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022768	Fascin-domain
IPR024703	Fascin_metazoans
IPR008999	Actin_cross-linking

Vocabulary: **Molecular Function**
Term	Definition
GO:0030674	protein binding, bridging
GO:0051015	actin filament binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0030674	protein binding, bridging

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.80.10.50		coord: 154..273 e-value: 1.5E-22 score: 79.8
None	No IPR available	GENE3D	2.80.10.50		coord: 404..512 e-value: 1.2E-16 score: 60.8
None	No IPR available	GENE3D	2.80.10.50		coord: 18..153 e-value: 8.6E-17 score: 61.0
None	No IPR available	GENE3D	2.80.10.50		coord: 274..403 e-value: 7.7E-23 score: 80.4
IPR022768	Fascin domain	PFAM	PF06268	Fascin	coord: 438..512 e-value: 2.9E-7 score: 30.6 coord: 282..393 e-value: 3.2E-12 score: 46.6 coord: 38..144 e-value: 7.9E-17 score: 61.4 coord: 158..268 e-value: 5.4E-17 score: 61.9
IPR022768	Fascin domain	CDD	cd00257	Fascin	coord: 154..268 e-value: 2.67099E-21 score: 88.486
IPR022768	Fascin domain	CDD	cd00257	Fascin	coord: 400..512 e-value: 1.81831E-21 score: 88.8712
IPR024703	Fascin, metazoans	PIRSF	PIRSF005682	Fascin	coord: 17..512 e-value: 3.6E-133 score: 442.6
IPR008999	Actin cross-linking	SUPERFAMILY	50405	Actin-crosslinking proteins	coord: 400..512
IPR008999	Actin cross-linking	SUPERFAMILY	50405	Actin-crosslinking proteins	coord: 154..267
IPR008999	Actin cross-linking	SUPERFAMILY	50405	Actin-crosslinking proteins	coord: 274..398
IPR008999	Actin cross-linking	SUPERFAMILY	50405	Actin-crosslinking proteins	coord: 27..155

Blast

[Close]

BLAST of TCONS_00067339-protein vs. Swiss-Prot (Human)
Match: FSCN1 (Fascin OS=Homo sapiens GN=FSCN1 PE=1 SV=3)

HSP 1 Score: 337.806 bits (865), Expect = 8.625e-111
Identity = 195/500 (39.00%), Postives = 281/500 (56.20%), Query Frame = 0

Query:   21 NGHDASNGIVFGLMNQQGKYLTAEKFGNQISVTGTSLRSKQLWTFE--PEGAESSKGYLRSPQKNYLETTKTGTVTCEAEEKEVSLLFDVTVADDGRWAFK-DSFGKFLAGNTERLYTTMDSKQADEYLWAIHIAGHPQCNMRSVSRKRFVHL---KDDQLCANEDIPWGHDAVITLEFHRGKYAIRDSNGRYLNGESGELETTSTEECMFSIALQDTEFAFKSSSGKYLTVYGPAGKLIANKKA-ISRDELFALEQSKAQVMLTANNGKTASIKQGIDVTANQFLELGDFGDTETFQMEFIDGQQNQVTFLSKNKKYWT-AGNKSVTSSADQISPECIFELEYEGDKIALKAHNDRYITSTSGGKLVPTGETTSDANTLFLMQLMNRPILVLRCEHGYVGLIDSNDKVQCSRGGYDAMLVEGDGQGRYRLKTSKGKSWKVDGTSHLLQSSDEGDLFLFELCSKNKMRIQASNGKYLKGDHNGVITASAGKDDRNILWEY 512
            NG   +  I FGL+N   KYLTAE FG +++ + +SL+ KQ+WT E  P+ A S+   LRS    YL   K G VTCE E       F +   DDGRW+ + ++  ++  G  +RL     +    E  W++HIA HPQ N+ SV+RKR+ HL     D++  + D+PWG D++ITL F   +Y+++ ++ R+L  + G L         +++  +  + AF+   G+YL   GP+G L A K   + +DELFALEQS AQV+L A N +  S +QG+D++ANQ  E     D ETFQ+E ID    +  F +   KYWT      V S+A   +  C F++E+   +I L+A N +++TS   G+L  + ET  D+  LFLM+L+NRPI+V R EHG++G       +  +R  YD   +E +  G Y +K S GK W V   S +  S D    F FE C  NK+ I+   G+YLKGDH GV+ ASA   D   LWEY
Sbjct:    4 NGTAEAVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDRLSCFAQTVSPAEK-WSVHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLAFQDQRYSVQTADHRFLRHD-GRLVARPEPATGYTLEFRSGKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEET----DQETFQLE-IDRDTKKCAFRTHTGKYWTLTATGGVQSTASSKNASCYFDIEWRDRRITLRASNGKFVTSKKNGQLAASVETAGDSE-LFLMKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSYDVFQLEFN-DGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEFCDYNKVAIKV-GGRYLKGDHAGVLKASAETVDPASLWEY 493

The following BLAST results are available for this feature:

BLAST of TCONS_00067339-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067339-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
FSCN1	8.625e-111	39.00	Fascin OS=Homo sapiens GN=FSCN1 PE=1 SV=3	[more]

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TCONS_00067339-protein (polypeptide) - C. hemisphaerica

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