TCONS_00067323-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067323-protein
Unique Name	TCONS_00067323-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	543

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067323-protein ID=TCONS_00067323-protein|Name=TCONS_00067323-protein|organism=Clytia hemisphaerica|type=polypeptide|length=543bp
MMQNELEDGGNSNNKENTNDEEIYGPAVEDNGWIPKLFENNYRTTQLIFT
KKNGRTFTCLRQPRDLYTSSKSDIHLNIWWPSEAQIYSRRPLHILYTPPK
PELLHKKEKDFSDQLDKSANVFGKVVYDNSPDPEIRYFVNSKTDPRTTSS
PAPYYTLKDESDNTLQFESRFESGNLMRAIKTGEYEYQLWLKFDLYTKKH
TQWFYFQVKNAHPNKIYKFTIMNFLKSGSLYNEGMKPLLYSERDAQEKKI
GWIRAGTHIKYYKNDIKIEENKERTYYSLHWRCSFANDNDTYYLAHSYPY
TYSDLQEYLMFLSNDPQRKKCCKQRVLCQTLAGNQIYLLTITTPTRCPKQ
AKIKRTIVITARIHPGETIGSWMMKGLLDYLTSNEADAKILRETFIFKII
PMLNPDGVIVGNYRCSLAGRDLNRNYKTVLKDSFPPVWSTKYLVKKLQEE
REVVLYCDLHGHSRKKNIFVYGCENKQEKLSTRLNTRLFPYILAKNAPDK
FSFTNCRFRVQKNKEGTGRVVMWNTGIRYSYTLEVPTFSLLAS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042073	XLOC_042073	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067323	TCONS_00067323	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000834	Peptidase_M14

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0004181	metallocarboxypeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004181	metallocarboxypeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000834	Peptidase M14, carboxypeptidase A	PFAM	PF00246	Peptidase_M14	coord: 327..536 e-value: 2.1E-20 score: 73.6
None	No IPR available	GENE3D	3.40.630.10		coord: 288..540 e-value: 1.9E-63 score: 213.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	SUPERFAMILY	53187	Zn-dependent exopeptidases	coord: 290..537

Blast

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BLAST of TCONS_00067323-protein vs. Swiss-Prot (Human)
Match: CBPC3 (Cytosolic carboxypeptidase 3 OS=Homo sapiens GN=AGBL3 PE=2 SV=2)

HSP 1 Score: 512.301 bits (1318), Expect = 6.068e-172
Identity = 253/498 (50.80%), Postives = 331/498 (66.47%), Query Frame = 0

Query:   43 RTTQLIFTKKNGRTFTCLRQPRDLYTSSKSDIHLNIWWPSEAQIYSRRPLHILYTPPKPELLH-----KKEKDFSDQLDKSANVFGKVVYDNSPDPEIRYFVNSKTDPRTTSSPAPYYTLKDESDNTLQFESRFESGNLMRAIKTGEYEYQLWLKFDLYTKKHTQWFYFQVKNAHPNKIYKFTIMNFLKSGSLYNEGMKPLLYSERDAQEKKIGWIRAGTHIKYYKNDIKIEENKERTYYSLHWRCSFANDNDTYYLAHSYPYTYSDLQEYLMFLSNDPQRKKCCKQRVLCQTLAGNQIYLLTITTPTRCPKQAKIKRTIVITARIHPGETIGSWMMKGLLDYLTSNEADAKILRETFIFKIIPMLNPDGVIVGNYRCSLAGRDLNRNYKTVLKDSFPPVWSTKYLVKKLQEEREVVLYCDLHGHSRKKNIFVYGCENKQEKLSTRLNTRLFPYILAKNAPDKFSFTNCRFRVQKNKEGTGRVVMWNTGIRYSYTLEV 535
            RTTQ++   + GR    LR+PRDLY  S S       WP   ++   +  HI +TP  PE ++     + E  + D  + +     +  Y          FV S+     T    P     D  DNTL FE+RFESGNL + +K  EYEYQL ++ DL+T KHTQW+YFQV N     +Y+FTI+NF K  SLY+ GM+PL YSE++A+   IGW R G  IKYY+N+        R Y+SL W   F ++ DT Y AH YPYTY++LQEYL  ++NDP R K CK RVLC TLA N +Y+LTITTP +     K ++ +++TAR+HPGET  SW+MKG LDY+  N +DA++LR+TF+FK++PMLNPDGVIVGNYRCSLAGRDLNRNY ++LK+SFP VW T+ +V +L E+REV+LYCDLHGHSRK+NIF+YGC+      +  L  R+FP +L+KN PDKFSF+ C+F VQK+KEGTGRVVMW  GIR S+T+E 
Sbjct:   52 RTTQILLEYQLGRWVPRLREPRDLYGVSSSGPLSPTRWPYHCEVIDEKVQHIDWTPSCPEPVYIPTGLETEPLYPDSKEATVVYLAEDAYKEP------CFVYSRVGGNRTPLKQPV----DYRDNTLMFEARFESGNLQKVVKVAEYEYQLTVRPDLFTNKHTQWYYFQVTNMRAGIVYRFTIVNFTKPASLYSRGMRPLFYSEKEAKAHHIGWQRIGDQIKYYRNN---PGQDGRHYFSLTWTFQFPHNKDTCYFAHCYPYTYTNLQEYLSGINNDPVRSKFCKIRVLCHTLARNMVYILTITTPLKNSDSRK-RKAVILTARVHPGETNSSWIMKGFLDYILGNSSDAQLLRDTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRLMEKREVILYCDLHGHSRKENIFMYGCDGSDRSKTLYLQQRIFPLMLSKNCPDKFSFSACKFNVQKSKEGTGRVVMWKMGIRNSFTMEA 535

The following BLAST results are available for this feature:

BLAST of TCONS_00067323-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067323-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
CBPC3	6.068e-172	50.80	Cytosolic carboxypeptidase 3 OS=Homo sapiens GN=AG...	[more]

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TCONS_00067323-protein (polypeptide) - C. hemisphaerica

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