TCONS_00067220-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067220-protein
Unique Name	TCONS_00067220-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	417

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067220-protein ID=TCONS_00067220-protein|Name=TCONS_00067220-protein|organism=Clytia hemisphaerica|type=polypeptide|length=417bp
MEDRGSQIFTVVKLAISLTLLCFLLHTLYLLRSSLIHLKCDPYDHRCSVT
LAGEDITDDVTTTTANVVQNDKRPKILIFSLPRSGSSFFGEMFNREDESF
YLFEPLHASEALTTLTPSSSKQAHDAAGNTQVVQRLNDLYKCDFREHEYL
FRLISYPEFSNPHFRLMSKVLASPPFCDYVMNSNATEAEYRKHCRTVDTR
TLMGICANKDMVVIKELMHRLPVYSPKDMSLLLQVENLKTIWLVRDPRAI
IASMISMGWITKTKTQTFEQVFESTTNKVCQLYEQFLVTMSLMPERYRQM
LNVLRYEDLVTRPRDVVLQIIQLTDGVIAEKSLEWIVRNTQEESTSYTTE
QEDSYSVYGRNATYSMTSWRSKFNLQQIFLIQGHCRHFMDRLGYNHFWEN
KTLTDLSIPSYRTVNRF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041994	XLOC_041994	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067220	TCONS_00067220	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000863	Sulfotransferase_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008146	sulfotransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008146	sulfotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 59..400 e-value: 7.4E-28 score: 97.1
IPR000863	Sulfotransferase domain	PFAM	PF00685	Sulfotransfer_1	coord: 74..392 e-value: 3.0E-17 score: 62.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 201..399 coord: 72..121

Blast

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BLAST of TCONS_00067220-protein vs. Swiss-Prot (Human)
Match: CHST1 (Carbohydrate sulfotransferase 1 OS=Homo sapiens GN=CHST1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.795e-21
Identity = 96/360 (26.67%), Postives = 155/360 (43.06%), Query Frame = 0

Query:   72 KRPKILIFSLPRSGSSFFGEMFNREDESFYLFEPLHASEALTTLTPSSSKQAHDAAGNTQVVQR---LNDLYKCDFREHEYLFRLISYPEFSNPHFRLM----SKVLASPPFCDYVMNSNAT--EAEYRKHCRTVDTRTLMGICANKDMVVIKELMHRLPVYSPKDMSLLLQVE--NLKTIWLVRDPRAIIAS----------MISMGWITKTKTQTFEQVFESTTNKVCQLYEQFLVTMSLMPERYRQMLNVLRYEDLVTRPRDVVLQIIQLTDGVIAEKSLEWIVRNTQEESTSYTTEQEDSYSVYG--RNATYSMTSWRSKFNLQQIFLIQGHCRHFMDRLGYNHFWENKTLTDLSI 408
            ++  ILI +  RSGSSF G++FN+  + FYLFEPL+  +   TL P  ++    A     +      L  LY CD     +L   I  P  ++   R+     S+VL S P CD    ++    E +  + C  ++       C  +  V IK +  R+P  +  D+  L++    NLK I LVRDPR I+AS          +  + + T  K    + V + TT  VC+ +   + T  + P   +    ++RYEDL   P     +I       +      WI  NT+ + T    +       YG  RN+  +   WR + +   +   Q  C+  + +LGY      + L + S+
Sbjct:   59 RKTHILILATTRSGSSFVGQLFNQHLDVFYLFEPLYHVQ--NTLIPRFTQGKSPADRRVMLGASRDLLRSLYDCDL---YFLENYIKPPPVNHTTDRIFRRGASRVLCSRPVCDPPGPADLVLEEGDCVRKCGLLNLTVAAEACRERSHVAIKTV--RVPEVN--DLRALVEDPRLNLKVIQLVRDPRGILASRSETFRDTYRLWRLWYGTGRKPYNLD-VTQLTT--VCEDFSNSVSTGLMRPPWLKGKYMLVRYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGDPTLGKHK-------YGTVRNSAATAEKWRFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELKNPSV 399

The following BLAST results are available for this feature:

BLAST of TCONS_00067220-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067220-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
CHST1	1.795e-21	26.67	Carbohydrate sulfotransferase 1 OS=Homo sapiens GN...	[more]

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TCONS_00067220-protein (polypeptide) - C. hemisphaerica

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