TCONS_00067200-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067200-protein
Unique NameTCONS_00067200-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length123

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067200-protein ID=TCONS_00067200-protein|Name=TCONS_00067200-protein|organism=Clytia hemisphaerica|type=polypeptide|length=123bp
MVQIFLKLGEDPKEWSIVELQGTLESSEEELCGSHIGNLHFDDKGTPQLI
CGHHLVTGKIQKLDKPYAVMKKNSISHGMSESMEIDDSDGQSTAYDIVAF
VKQKIIFKNRPKPIIIKTQPTKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041980XLOC_041980Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067200TCONS_00067200Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018607Ctf8
Vocabulary: Cellular Component
TermDefinition
GO:0031390Ctf18 RFC-like complex
Vocabulary: Biological Process
TermDefinition
GO:0007064mitotic sister chromatid cohesion
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007064 mitotic sister chromatid cohesion
cellular_component GO:0031390 Ctf18 RFC-like complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018607Chromosome transmission fidelity protein 8PFAMPF09696Ctf8coord: 36..114
e-value: 9.0E-13
score: 48.7

Blast
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BLAST of TCONS_00067200-protein vs. Swiss-Prot (Human)
Match: CTF8 (Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens GN=CHTF8 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.849e-22
Identity = 49/118 (41.53%), Postives = 71/118 (60.17%), Query Frame = 0 
Query:    1 MVQIFLKLGEDP--KEWSIVELQGTLESSEEE-LCGSHIGNLHFDDKGTPQLICGHHLVTGKIQKLDKPYAVMKKNSISHGMSESMEIDDSDGQSTAYDIVAFVKQKIIFKNRPKPII 115
            MVQI +         EW ++ELQG +E+     L G+ +G+LH+  +G P LI GHH++ GKI  L+KP+AV+ K+  + G  +  E+    G  T Y + A +K KI+FK RPKPII
Sbjct:    1 MVQIVISSARAGGLAEWVLMELQGEIEARYSTGLAGNLLGDLHYTTEGIPVLIVGHHILYGKIIHLEKPFAVLVKH--TPGDQDCDELGRETG--TRYLVTALIKDKILFKTRPKPII 114
The following BLAST results are available for this feature:
BLAST of TCONS_00067200-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTF81.849e-2241.53Chromosome transmission fidelity protein 8 homolog... [more]
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