Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00067200-protein ID=TCONS_00067200-protein|Name=TCONS_00067200-protein|organism=Clytia hemisphaerica|type=polypeptide|length=123bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR018607 Ctf8
Vocabulary: Cellular Component
Term Definition
GO:0031390 Ctf18 RFC-like complex
Vocabulary: Biological Process
Term Definition
GO:0007064 mitotic sister chromatid cohesion
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0007064 mitotic sister chromatid cohesion
cellular_component
GO:0031390 Ctf18 RFC-like complex
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
M V Q I F L K L G E D P K E W S I V E L Q G T L E S S E E E L C G S H I G N L H F D D K G T P Q L I C G H H L V T G K I Q K L D K P Y A V M K K N S I S H G M S E S M E I D D S D G Q S T A Y D I V A F V K Q K I I F K N R P K P I I I K T Q P T K T 10 20 30 40 50 60 70 80 90 100 110 120 Expect = 9.0E-13 / Score = 48.7 Sequence PF09696
IPR Term IPR Description Source Source Term Source Description Alignment
IPR018607 Chromosome transmission fidelity protein 8 PFAM PF09696 Ctf8 coord: 36..114
Blast
BLAST of TCONS_00067200-protein vs. Swiss-Prot (Human)
Match:
CTF8 (Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens GN=CHTF8 PE=1 SV=1)
HSP 1 Score: 84.7297 bits (208), Expect = 1.849e-22
Identity = 49/118 (41.53%), Postives = 71/118 (60.17%), Query Frame = 0
Query: 1 MVQIFLKLGEDP--KEWSIVELQGTLESSEEE-LCGSHIGNLHFDDKGTPQLICGHHLVTGKIQKLDKPYAVMKKNSISHGMSESMEIDDSDGQSTAYDIVAFVKQKIIFKNRPKPII 115
MVQI + EW ++ELQG +E+ L G+ +G+LH+ +G P LI GHH++ GKI L+KP+AV+ K+ + G + E+ G T Y + A +K KI+FK RPKPII
Sbjct: 1 MVQIVISSARAGGLAEWVLMELQGEIEARYSTGLAGNLLGDLHYTTEGIPVLIVGHHILYGKIIHLEKPFAVLVKH--TPGDQDCDELGRETG--TRYLVTALIKDKILFKTRPKPII 114
The following BLAST results are available for this feature:
BLAST of TCONS_00067200-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M V Q I F L K L G E D P K E W S I V E L Q G T L E S S E E E L C G S H I G N L H F D D K G T P Q L I C G H H L V T G K I Q K L D K P Y A V M K K N S I S H G M S E S M E I D D S D G Q S T A Y D I V A F V K Q K I I F K N R P K P I I I K T Q P T K T 10 20 30 40 50 60 70 80 90 100 110 120 Expect = 1.85e-22 / Id = 41.53 Sequence CTF8
Match Name E-value Identity Description
CTF8 1.849e-22 41.53 Chromosome transmission fidelity protein 8 homolog... [more]
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