TCONS_00067155-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067155-protein
Unique NameTCONS_00067155-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length585

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067155-protein ID=TCONS_00067155-protein|Name=TCONS_00067155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=585bp
MMWLYILYLSVLLSGVLCTDNYHEIRTSWIDSNESKILTIERNIGLTACV
MNCRRKYNDACVAIGFSTEDRFQVFSMAIDVEVCYYLSKVLFLRTHKTEA
FLEMMVIPLQSEEYQNNPPSQWLLGEDYELDFRENTLDIPRVNKSVVEVS
NNLTVSFWYKHNMTLAQDDYNAFTLTLYPLNVEKSCHDFGLYFDDDNDTW
VRFGGYVSYPRTPVHETGKWNHFLLTWDRHHGKYSLYLNGEVKYSKQNPE
YQSRGHKTGIILNLGNDVDKSSSDEMVCIPDDISQGTSGSFYGFNIWQKL
LTNKEIKLVFNKHWKFDEDITLIDWTDFRKVKSYPVDILPLQSHLNDHAP
VLDTTISINDDNPINIETSTILTNPLFGVDLHFSIWFRLQEKSLSEEESL
GRQTFFCAVDSHIESSEYSCGWLNICVNQTSGELHIVAMELWAVLSPDSL
TNTWINLQVKYSAKRKEITIYLNGGQEMKSTNIESDLSKQSEDKLKFQFG
NAVTDYHQKDCSLRNNTRWFGQIAEVYLWTRELSNEEMNLVFGQQVTRVS
SDGLIFTWYEVPNDFLITGGINYHNFDAEGFQFPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041956XLOC_041956Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067155TCONS_00067155Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450500550Expect = 3.0E-14 / Score = 52.8Expect = 4.6E-11 / Score = 42.5Expect = 1.0E-10 / Score = 41.9Score = Score = SequenceG3DSA:2.60.120.200G3DSA:2.60.120.200PF13385SSF49899SSF49899
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 126..315
e-value: 3.0E-14
score: 52.8
NoneNo IPR availableGENE3D2.60.120.200coord: 352..546
e-value: 4.6E-11
score: 42.5
NoneNo IPR availablePFAMPF13385Laminin_G_3coord: 446..537
e-value: 2.1E-6
score: 27.9
coord: 145..307
e-value: 1.0E-10
score: 41.9
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 142..317
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 375..544

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067155-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350400450500550Sequence
Match NameE-valueIdentityDescription
back to top