TCONS_00067094-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067094-protein
Unique Name	TCONS_00067094-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	788

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067094-protein ID=TCONS_00067094-protein|Name=TCONS_00067094-protein|organism=Clytia hemisphaerica|type=polypeptide|length=788bp
MPDGKVCPDQFRGFLWKWTNYIKGYQKRWCVLSNGLLSYYRNPAEMNHTC
RGTINLAGAFIDTVDSCSFAINGGSQVWHLRAGSEIERQRWVTALELAKA
KAIKNISEDESDSDMDDDISIKSIGAKLEDLTTCNSLVTSHGSLLQKTIS
DFSDNKETQETSQHLKHVNEKAQMFRITSNAMVNACSDFMELAKTYEKKF
NKLLTAERSKRMRLEETVETLAKQHMRLERACEKEKGKEKLSTTVTSIES
PTIKIPMSPLLEKETSTDQEDDDDDLFEDAMSDFPDQFPDKKKSDSHYQD
DEISLNEEDASILPAHDVSLNDLELIKRSSSEQTLSPNKEAPSSHRRWLS
EDIKAGSFKDIPAIAKSTESKVIVYRKRIPDRPNANLNLWSIMKNCIGKE
LSKIPMPVNFSEPLSMTQRLTEELEYSELLDKAATCQTSIEQICYIAAFS
ISCYASTAIRTGKPFNPLLGETYELDRTNDKGWTSLAEQVSHHPPSLAHH
AEGRGWTLWQNFTMSSKFRGKYLLVTPLGTAHCKFAKTGDHYTWKKVTTT
VNNIIVGKLWIDQSGDMEIKNHLTGEKCVLKYHAYSYFSRDTPKKVTGFV
ADKNNVTRYVLSGTWDQKVEIAKMVYKEPNAALSGKQPQGMPTSKSSNPQ
MLPSQLLWTKIPPVPGAKLMYHFGEFTCSLNQEAEGIAITDSRLRPDLRL
MEQQNFDDANKIKQQLEELQRVRRKLREQEAESASDEGRVYEGYKPRWFE
QINDEYMDGKIFIYKGGYWEAKEKNDWSTCPKIYLNSI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041923	XLOC_041923	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067094	TCONS_00067094	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001849	PH_domain
IPR011993	PH_dom-like
IPR000648	Oxysterol-bd

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 204..238
None	No IPR available	COILS	Coil	Coil	coord: 709..739
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..310
None	No IPR available	CDD	cd13284	PH_OSBP_ORP4	coord: 11..104 e-value: 2.01623E-60 score: 198.756
None	No IPR available	SUPERFAMILY	144000	Oxysterol-binding protein-like	coord: 383..784
IPR001849	Pleckstrin homology domain	SMART	SM00233	PH_update	coord: 9..102 e-value: 1.4E-18 score: 77.7
IPR001849	Pleckstrin homology domain	PFAM	PF00169	PH	coord: 11..98 e-value: 6.5E-13 score: 49.0
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 8..100 score: 12.098
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 10..244 e-value: 4.2E-22 score: 77.6
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 12..115
IPR000648	Oxysterol-binding protein	PFAM	PF01237	Oxysterol_BP	coord: 388..770 e-value: 5.4E-136 score: 453.2

Blast

[Close]

BLAST of TCONS_00067094-protein vs. Swiss-Prot (Human)
Match: OSBP2 (Oxysterol-binding protein 2 OS=Homo sapiens GN=OSBP2 PE=1 SV=2)

HSP 1 Score: 463.381 bits (1191), Expect = 1.499e-150
Identity = 226/415 (54.46%), Postives = 295/415 (71.08%), Query Frame = 0

Query:  376 RKRIPDRPNANLNLWSIMKNCIGKELSKIPMPVNFSEPLSMTQRLTEELEYSELLDKAATCQTSIEQICYIAAFSISCYASTAIRTGKPFNPLLGETYELDRTNDKGWTSLAEQVSHHPPSLAHHAEGR-GWTLWQNFTMSSKFRGKYLLVTPLGTAHCKFAKTGDHYTWKKVTTTVNNIIVGKLWIDQSGDMEIKNHLTGEKCVLKYHAYSYFSRDTPKKVTGFVADKNNVTRYVLSGTWDQKVEIAKMVYKEPNAALS-GKQPQGMPTSKSSNPQMLPSQLLWTKIPPVPGAKLMYHFGEFTCSLNQEAEGIAITDSRLRPDLRLMEQQNFDDANKIKQQLEELQRVRRKLREQEA----ESASDEGRVYEGYKPRWFEQINDEYMDGKIFIYKGGYWEAKEKNDWSTCPKIY 784
            R RIP++PN +LNLWSIMKNCIG+ELS+IPMPVNF+EPLSM QRLTE+LEY  LLDKA  C +S+EQ+C +AAFS+S Y++T  R  KPFNP+LGET+ELDR +D G  SL EQVSHHPPS AH+   + GW+LWQ  T+SSKFRGKY+ + PLG  H +F  +G+HY W+K T+TV+NIIVGKLWIDQSGD+EI NH T ++C LK+  YSYFS++  +KVTG V+D      YVLSG+WD+++E +K+++  P++  S GKQ         +  Q L ++LLW K P    A+ MY+F E   +LN+  EG+A TDSRLRPD RLME+  +D+AN  KQ+LEE QR+ R+ R +        +S+E +  + Y P WFE+  D        +YKGGYWEAKEK DW  CP I+
Sbjct:  510 RVRIPNKPNYSLNLWSIMKNCIGRELSRIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAVHCTSSVEQMCLVAAFSVSSYSTTVHRIAKPFNPMLGETFELDRLDDMGLRSLCEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYVWRKSTSTVHNIIVGKLWIDQSGDIEIVNHKTNDRCQLKFLPYSYFSKEAARKVTGVVSDSQGKAHYVLSGSWDEQMECSKVMHSSPSSPSSDGKQ--------KTVYQTLSAKLLWKKYPLPENAENMYYFSELALTLNEHEEGVAPTDSRLRPDQRLMEKGRWDEANTEKQRLEEKQRLSRRRRLEACGPGSSCSSEEEKEADAYTPLWFEKRLDPLTGEMACVYKGGYWEAKEKQDWHMCPNIF 916

HSP 2 Score: 261.536 bits (667), Expect = 5.873e-75
Identity = 123/241 (51.04%), Postives = 170/241 (70.54%), Query Frame = 0

Query:    9 DQFRGFLWKWTNYIKGYQKRWCVLSNGLLSYYRNPAEMNHTCRGTINLAGAFIDTVDSCSFAINGGSQVWHLRAGSEIERQRWVTALELAKAKAIKNISEDESDSDMDDDI-----------SIKSIGAKLEDLTTCNSLVTSHGSLLQKTISDFSDNKETQETSQHLKHVNEKAQMFRITSNAMVNACSDFMELAKTYEKKFNKLLTAERSKRMRLEETVETLAKQHMRLERACEKEKGK 238
            D F G+L KWTNY+KGYQ+RW VL NGLLSYYRN  EM HTCRGTINL+ A IDT DSC   +  G++ +HL+A SE++RQ+W+TALELAKAKA++ ++    DS  DD+            ++K++  KL+DL+TCN L+  HG+ LQ+++++    K   E+ + LK VNE+A +FRITSNAM+NAC DF+ELA+ + +K+ + L  E+ +R+ LEET+E LAKQH  LERA     G+
Sbjct:  183 DSFEGWLLKWTNYLKGYQRRWFVLGNGLLSYYRNQGEMAHTCRGTINLSTAHIDTEDSCGILLTSGARSYHLKASSEVDRQQWITALELAKAKAVRVMNTHSDDSGDDDEATTPADKSELHHTLKNLSLKLDDLSTCNDLIAKHGAALQRSLTELDGLKIPSESGEKLKVVNERATLFRITSNAMINACRDFLELAEIHSRKWQRALQYEQEQRVHLEETIEQLAKQHNSLERAFHSAPGR 423

The following BLAST results are available for this feature:

BLAST of TCONS_00067094-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067094-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
OSBP2	1.499e-150	54.46	Oxysterol-binding protein 2 OS=Homo sapiens GN=OSB...	[more]

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TCONS_00067094-protein (polypeptide) - C. hemisphaerica