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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00067094-protein ID=TCONS_00067094-protein|Name=TCONS_00067094-protein|organism=Clytia hemisphaerica|type=polypeptide|length=788bp
MPDGKVCPDQFRGFLWKWTNYIKGYQKRWCVLSNGLLSYYRNPAEMNHTC
RGTINLAGAFIDTVDSCSFAINGGSQVWHLRAGSEIERQRWVTALELAKA
KAIKNISEDESDSDMDDDISIKSIGAKLEDLTTCNSLVTSHGSLLQKTIS
DFSDNKETQETSQHLKHVNEKAQMFRITSNAMVNACSDFMELAKTYEKKF
NKLLTAERSKRMRLEETVETLAKQHMRLERACEKEKGKEKLSTTVTSIES
PTIKIPMSPLLEKETSTDQEDDDDDLFEDAMSDFPDQFPDKKKSDSHYQD
DEISLNEEDASILPAHDVSLNDLELIKRSSSEQTLSPNKEAPSSHRRWLS
EDIKAGSFKDIPAIAKSTESKVIVYRKRIPDRPNANLNLWSIMKNCIGKE
LSKIPMPVNFSEPLSMTQRLTEELEYSELLDKAATCQTSIEQICYIAAFS
ISCYASTAIRTGKPFNPLLGETYELDRTNDKGWTSLAEQVSHHPPSLAHH
AEGRGWTLWQNFTMSSKFRGKYLLVTPLGTAHCKFAKTGDHYTWKKVTTT
VNNIIVGKLWIDQSGDMEIKNHLTGEKCVLKYHAYSYFSRDTPKKVTGFV
ADKNNVTRYVLSGTWDQKVEIAKMVYKEPNAALSGKQPQGMPTSKSSNPQ
MLPSQLLWTKIPPVPGAKLMYHFGEFTCSLNQEAEGIAITDSRLRPDLRL
MEQQNFDDANKIKQQLEELQRVRRKLREQEAESASDEGRVYEGYKPRWFE
QINDEYMDGKIFIYKGGYWEAKEKNDWSTCPKIYLNSI Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 204..238 |
| None | No IPR available | COILS | Coil | Coil | coord: 709..739 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 233..310 |
| None | No IPR available | CDD | cd13284 | PH_OSBP_ORP4 | coord: 11..104
e-value: 2.01623E-60
score: 198.756 |
| None | No IPR available | SUPERFAMILY | 144000 | Oxysterol-binding protein-like | coord: 383..784 |
| IPR001849 | Pleckstrin homology domain | SMART | SM00233 | PH_update | coord: 9..102
e-value: 1.4E-18
score: 77.7 |
| IPR001849 | Pleckstrin homology domain | PFAM | PF00169 | PH | coord: 11..98
e-value: 6.5E-13
score: 49.0 |
| IPR001849 | Pleckstrin homology domain | PROSITE | PS50003 | PH_DOMAIN | coord: 8..100
score: 12.098 |
| IPR011993 | PH domain-like | GENE3D | 2.30.29.30 | | coord: 10..244
e-value: 4.2E-22
score: 77.6 |
| IPR011993 | PH domain-like | SUPERFAMILY | 50729 | PH domain-like | coord: 12..115 |
| IPR000648 | Oxysterol-binding protein | PFAM | PF01237 | Oxysterol_BP | coord: 388..770
e-value: 5.4E-136
score: 453.2 |
Blast
BLAST of TCONS_00067094-protein vs. Swiss-Prot (Human)
Match: OSBP2 (Oxysterol-binding protein 2 OS=Homo sapiens GN=OSBP2 PE=1 SV=2) HSP 1 Score: 463.381 bits (1191), Expect = 1.499e-150 Identity = 226/415 (54.46%), Postives = 295/415 (71.08%), Query Frame = 0 Query: 376 RKRIPDRPNANLNLWSIMKNCIGKELSKIPMPVNFSEPLSMTQRLTEELEYSELLDKAATCQTSIEQICYIAAFSISCYASTAIRTGKPFNPLLGETYELDRTNDKGWTSLAEQVSHHPPSLAHHAEGR-GWTLWQNFTMSSKFRGKYLLVTPLGTAHCKFAKTGDHYTWKKVTTTVNNIIVGKLWIDQSGDMEIKNHLTGEKCVLKYHAYSYFSRDTPKKVTGFVADKNNVTRYVLSGTWDQKVEIAKMVYKEPNAALS-GKQPQGMPTSKSSNPQMLPSQLLWTKIPPVPGAKLMYHFGEFTCSLNQEAEGIAITDSRLRPDLRLMEQQNFDDANKIKQQLEELQRVRRKLREQEA----ESASDEGRVYEGYKPRWFEQINDEYMDGKIFIYKGGYWEAKEKNDWSTCPKIY 784
R RIP++PN +LNLWSIMKNCIG+ELS+IPMPVNF+EPLSM QRLTE+LEY LLDKA C +S+EQ+C +AAFS+S Y++T R KPFNP+LGET+ELDR +D G SL EQVSHHPPS AH+ + GW+LWQ T+SSKFRGKY+ + PLG H +F +G+HY W+K T+TV+NIIVGKLWIDQSGD+EI NH T ++C LK+ YSYFS++ +KVTG V+D YVLSG+WD+++E +K+++ P++ S GKQ + Q L ++LLW K P A+ MY+F E +LN+ EG+A TDSRLRPD RLME+ +D+AN KQ+LEE QR+ R+ R + +S+E + + Y P WFE+ D +YKGGYWEAKEK DW CP I+
Sbjct: 510 RVRIPNKPNYSLNLWSIMKNCIGRELSRIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAVHCTSSVEQMCLVAAFSVSSYSTTVHRIAKPFNPMLGETFELDRLDDMGLRSLCEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYVWRKSTSTVHNIIVGKLWIDQSGDIEIVNHKTNDRCQLKFLPYSYFSKEAARKVTGVVSDSQGKAHYVLSGSWDEQMECSKVMHSSPSSPSSDGKQ--------KTVYQTLSAKLLWKKYPLPENAENMYYFSELALTLNEHEEGVAPTDSRLRPDQRLMEKGRWDEANTEKQRLEEKQRLSRRRRLEACGPGSSCSSEEEKEADAYTPLWFEKRLDPLTGEMACVYKGGYWEAKEKQDWHMCPNIF 916 HSP 2 Score: 261.536 bits (667), Expect = 5.873e-75 Identity = 123/241 (51.04%), Postives = 170/241 (70.54%), Query Frame = 0 Query: 9 DQFRGFLWKWTNYIKGYQKRWCVLSNGLLSYYRNPAEMNHTCRGTINLAGAFIDTVDSCSFAINGGSQVWHLRAGSEIERQRWVTALELAKAKAIKNISEDESDSDMDDDI-----------SIKSIGAKLEDLTTCNSLVTSHGSLLQKTISDFSDNKETQETSQHLKHVNEKAQMFRITSNAMVNACSDFMELAKTYEKKFNKLLTAERSKRMRLEETVETLAKQHMRLERACEKEKGK 238
D F G+L KWTNY+KGYQ+RW VL NGLLSYYRN EM HTCRGTINL+ A IDT DSC + G++ +HL+A SE++RQ+W+TALELAKAKA++ ++ DS DD+ ++K++ KL+DL+TCN L+ HG+ LQ+++++ K E+ + LK VNE+A +FRITSNAM+NAC DF+ELA+ + +K+ + L E+ +R+ LEET+E LAKQH LERA G+
Sbjct: 183 DSFEGWLLKWTNYLKGYQRRWFVLGNGLLSYYRNQGEMAHTCRGTINLSTAHIDTEDSCGILLTSGARSYHLKASSEVDRQQWITALELAKAKAVRVMNTHSDDSGDDDEATTPADKSELHHTLKNLSLKLDDLSTCNDLIAKHGAALQRSLTELDGLKIPSESGEKLKVVNERATLFRITSNAMINACRDFLELAEIHSRKWQRALQYEQEQRVHLEETIEQLAKQHNSLERAFHSAPGR 423
The following BLAST results are available for this feature:
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