TCONS_00067053-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067053-protein
Unique Name	TCONS_00067053-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	665

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067053-protein ID=TCONS_00067053-protein|Name=TCONS_00067053-protein|organism=Clytia hemisphaerica|type=polypeptide|length=665bp
VFYSLSQNYCKQKKKCAHTRYLLQQKKKMVSIKMMLILSVIAILTSIFGF
TNTILTTMTLLLITNYQRLPVMIYCLPRELKFLSKIIRMVINLKKLQRKP
LCELFANIAKKYPDKIAIIDAETDQSLTFNEFLKLTHKIANFFQANGFTK
GDNVAIMLPNQIEYIPMYLGLSSIGVSAAFININQVGETLKHSLNVMEFK
AIIYHTDLEETLRNLNLVDNDSGKLFFTFGEKSNSKNNLELLLKNVSSDL
PQIDYGISPDYPVAYVFTSGTTGHPKPAVMARKKFTAGYLIFRYLTSIDT
NDIVYNTLPMYHTSGSLIFFAGTILCGSTMVFRKKFSASKFLEDCRKYNV
TYVGYIGEMMRYLLAQPEKEIDRQHHIKKIVGNGLRRSLFTQLRSRFNIE
HIYEFYGATESNVGFINDDNTDGAVGFLFKCFPFLNLKTLVKIDQNTGEL
IRDDNGFCIECEPGEPGTMVGLINNNQPYYGYVQKNDSVKKVARNVFQSG
DSYFMTGDLLMTDQFGYLYFLDRLGDTFRWKGENVSTVEIENIVSSSFES
YTHCIVYGQAIPGYEGRAGMVYINDPSINLRMINTVFNDNWKHNLPSYAL
PVFVRVGNEMQVTSTFKYQKEQLKKEGFDLEYLMDDEKIFFLFGDSYVEF
DELLFQDLKDGKIIL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041892	XLOC_041892	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067053	TCONS_00067053	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000873	AMP-dep_Synth/Lig
IPR020845	AMP-binding_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.980		coord: 270..427 e-value: 6.9E-34 score: 116.3
None	No IPR available	GENE3D	3.30.300.30		coord: 525..634 e-value: 3.6E-8 score: 33.2
None	No IPR available	GENE3D	2.30.38.10		coord: 441..524 e-value: 2.9E-6 score: 26.7
None	No IPR available	GENE3D	3.40.50.980		coord: 98..269 e-value: 3.3E-30 score: 104.6
None	No IPR available	CDD	cd05940	FATP_FACS	coord: 124..630 e-value: 5.17223E-179 score: 518.718
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 97..630
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 106..530 e-value: 3.4E-63 score: 213.6
IPR020845	AMP-binding, conserved site	PROSITE	PS00455	AMP_BINDING	coord: 265..276

Blast

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BLAST of TCONS_00067053-protein vs. Swiss-Prot (Human)
Match: S27A4 (Long-chain fatty acid transport protein 4 OS=Homo sapiens GN=SLC27A4 PE=1 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 1.246e-143
Identity = 227/576 (39.41%), Postives = 344/576 (59.72%), Query Frame = 0

Query:   97 QRKPLCELFANIAKKYPDKIAIIDAETDQSLTFNEFLKLTHKIANFFQANGFTKGDNVAIMLPNQIEYIPMYLGLSSIGVSAAFININQVGETLKHSLNVMEFKAIIYHTDLEETLRNLNLVDNDSGKLF----FTFGEKSNSKNNLELLLKNVSSDLPQI-DYGISPDYPVAYVFTSGTTGHPKPAVMARKKFTAGYLIFRYLTSIDTNDIVYNTLPMYHTSGSLIFFAGTILCGSTMVFRKKFSASKFLEDCRKYNVTYVGYIGEMMRYLLAQPEKEIDRQHHIKKIVGNGLRRSLFTQLRSRFNIEHIYEFYGATESNVGFINDDNTDGAVGFLFKCFPFLNLKTLVKIDQNTGELIRDDNGFCIECEPGEPGTMVGLINNNQP---YYGYVQKNDSVKKVARNVFQSGDSYFMTGDLLMTDQFGYLYFLDRLGDTFRWKGENVSTVEIENIVSSSFESYTHCIVYGQAIPGYEGRAGMVYINDPSINLRMINTVFNDNWKHNLPSYALPVFVRVGNEMQVTSTFKYQKEQLKKEGFDLEYLMDDEKIFFLFGDS--YVEFDELLFQDLKDGK 662
            +R+ +  LFA+  +++PDK A+I   TD   TF +  + +  +ANF QA G   GD  AI + N+ E++ ++LG++ +GV AA IN N   + L H L     +A+++ +++   +  ++   + S  LF    +  G    S  +L+ LLK+    LP   D G +    + Y++TSGTTG PK A++   ++     +  Y   +  NDIVY+ LP+YH++G+++     +L G T+V RKKFSAS+F +DC KYN T V YIGE+ RYLL QP +E + QH ++  +GNGLR+S++T   SRF+I  + EFYGATE N    N D+  GA GF  +   F+    LV+++++T ELIR  +G CI C+PGEPG +VG I    P   + GY+ +  + KK+A++VF+ GD  ++TGD+L+ D+ GYLYF DR GDTFRWKGENVST E+E  +S   +      VYG  +PG EGRAGM  +  P+ N  +    F    +  LP YA P+F+R+  E+  T T+K+QK +L+KEGFD   + D   +F+L      YV  D+  +  ++ G+
Sbjct:   72 ERRTVPILFASTVRRHPDKTALIFEGTDTHWTFRQLDEYSSSVANFLQARGLASGDVAAIFMENRNEFVGLWLGMAKLGVEAALINTNLRRDALLHCLTTSRARALVFGSEMASAICEVHASLDPSLSLFCSGSWEPGAVPPSTEHLDPLLKDAPKHLPSCPDKGFTDK--LFYIYTSGTTGLPKAAIVVHSRYYRMAALVYYGFRMRPNDIVYDCLPLYHSAGNIVGIGQCLLHGMTVVIRKKFSASRFWDDCIKYNCTIVQYIGELCRYLLNQPPREAENQHQVRMALGNGLRQSIWTNFSSRFHIPQVAEFYGATECNCSLGNFDSQVGACGFNSRILSFVYPIRLVRVNEDTMELIRGPDGVCIPCQPGEPGQLVGRIIQKDPLRRFDGYLNQGANNKKIAKDVFKKGDQAYLTGDVLVMDELGYLYFRDRTGDTFRWKGENVSTTEVEGTLSRLLD-MADVAVYGVEVPGTEGRAGMAAVASPTGNCDLER--FAQVLEKELPLYARPIFLRLLPELHKTGTYKFQKTELRKEGFDPAIVKD--PLFYLDAQKGRYVPLDQEAYSRIQAGE 640

The following BLAST results are available for this feature:

BLAST of TCONS_00067053-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067053-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
S27A4	1.246e-143	39.41	Long-chain fatty acid transport protein 4 OS=Homo ...	[more]

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TCONS_00067053-protein (polypeptide) - C. hemisphaerica

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