Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00066994-protein ID=TCONS_00066994-protein|Name=TCONS_00066994-protein|organism=Clytia hemisphaerica|type=polypeptide|length=276bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0005515 protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0005515 protein binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
20 40 60 80 100 120 140 160 180 200 220 240 260 Expect = 180.0 / Score = 4.1 Expect = 230.0 / Score = 3.3 Expect = 110.0 / Score = 5.8 Expect = 350.0 / Score = 1.9 Expect = 27.0 / Score = 10.5 Score = Expect = 5.8 / Score = 15.2 Expect = 48.0 / Score = 7.7 Expect = 17.0 / Score = 11.3 Expect = 50.0 / Score = 7.5 Expect = 74.0 / Score = 6.2 Expect = 0.0078 / Score = 25.4 Expect = 1.4E-8 / Score = 34.2 Expect = 1.2E-7 / Score = 31.2 Expect = 0.012 / Score = 15.5 Score = 6.811 Score = 5.725 Score = 5.563 Score = 6.903 Score = 4.963 Score = 5.964 Score = 6.087 Score = 7.627 Expect = 2.3E-25 / Score = 88.4 Expect = 9.0E-25 / Score = 86.2 Score = Sequence SM00364 mobidb-lite SM00369 PF13855 PF13516 PS51450 PS51450 PS51450 PS51450 PS51450 PS51450 PS51450 PS51450 G3DSA:3.80.10.10 G3DSA:3.80.10.10 SSF52058
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available SMART SM00364 LRR_bac_2 coord: 62..81 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 252..276 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 LRR_typ_2 coord: 85..108 IPR001611 Leucine-rich repeat PFAM PF13855 LRR_8 coord: 136..192 IPR001611 Leucine-rich repeat PFAM PF13516 LRR_6 coord: 108..123 IPR001611 Leucine-rich repeat PROSITE PS51450 LRR coord: 181..202 IPR001611 Leucine-rich repeat PROSITE PS51450 LRR coord: 135..156 IPR001611 Leucine-rich repeat PROSITE PS51450 LRR coord: 110..133 IPR001611 Leucine-rich repeat PROSITE PS51450 LRR coord: 64..86 IPR001611 Leucine-rich repeat PROSITE PS51450 LRR coord: 87..108 IPR001611 Leucine-rich repeat PROSITE PS51450 LRR coord: 16..37 IPR001611 Leucine-rich repeat PROSITE PS51450 LRR coord: 158..179 IPR001611 Leucine-rich repeat PROSITE PS51450 LRR coord: 41..62 IPR032675 Leucine-rich repeat domain, L domain-like GENE3D 3.80.10.10 coord: 111..275 IPR032675 Leucine-rich repeat domain, L domain-like GENE3D 3.80.10.10 coord: 2..110 IPR032675 Leucine-rich repeat domain, L domain-like SUPERFAMILY 52058 L domain-like coord: 14..222
Blast
BLAST of TCONS_00066994-protein vs. Swiss-Prot (Human)
Match:
RSU1 (Ras suppressor protein 1 OS=Homo sapiens GN=RSU1 PE=1 SV=3)
HSP 1 Score: 305.449 bits (781), Expect = 1.179e-104
Identity = 154/273 (56.41%), Postives = 198/273 (72.53%), Query Frame = 0
Query: 1 MSKSVKKVMEESRNRGLEEIDLVDKGITNIADVPYLLNMRNITTLTLSHNRITKLPDAVANLASLENLNLFNNDLETLPLTICNLPKLRFLNCGINKLQELPKGFGACPTLEVLDLTYNNLTDRSFPGNFFYLAPLRALYLGDNEFEVLPPEIKNLVNLQVLVVRDNDLISIPKEIGELTKLRELHIQNNRLQVLPPELGYLDLVSPKHMLRADNNPWIKEIADQLVLGTSHVLTYLRTTGKDGYEERYKAV--KAMNSAP-PPKKEREKTLK 270
MSKS+KK++EESR + E+D+ D+GI+N+ DV L + +IT L LSHN++T +P +A L +LE LN FNN +E LP I +L KL+ LN G+N+L LP+GFG+ P LEVLDLTYNNL++ S PGNFFYL LRALYL DN+FE+LPP+I L LQ+L +RDNDLIS+PKEIGELT+L+ELHIQ NRL VLPPELG LDL K + +A+NNPW+ IADQ LG SHV Y+R+ E YK + + M + P PPKK +K+ K
Sbjct: 1 MSKSLKKLVEESREKNQPEVDMSDRGISNMLDVNGLFTLSHITQLVLSHNKLTMVPPNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNTLPRGFGSLPALEVLDLTYNNLSENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRLTVLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHVFEYIRS-------ETYKYLYGRHMQANPEPPKKNNDKSKK 266
The following BLAST results are available for this feature:
BLAST of TCONS_00066994-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M S K S V K K V M E E S R N R G L E E I D L V D K G I T N I A D V P Y L L N M R N I T T L T L S H N R I T K L P D A V A N L A S L E N L N L F N N D L E T L P L T I C N L P K L R F L N C G I N K L Q E L P K G F G A C P T L E V L D L T Y N N L T D R S F P G N F F Y L A P L R A L Y L G D N E F E V L P P E I K N L V N L Q V L V V R D N D L I S I P K E I G E L T K L R E L H I Q N N R L Q V L P P E L G Y L D L V S P K H M L R A D N N P W I K E I A D Q L V L G T S H V L T Y L R T T G K D G Y E E R Y K A V K A M N S A P P P K K E R E K T L K K K K D K K 20 40 60 80 100 120 140 160 180 200 220 240 260 Expect = 1.18e-104 / Id = 56.41 Sequence RSU1
Match Name E-value Identity Description
RSU1 1.179e-104 56.41 Ras suppressor protein 1 OS=Homo sapiens GN=RSU1 P... [more]
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