TCONS_00066934-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066934-protein
Unique Name	TCONS_00066934-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	477

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066934-protein ID=TCONS_00066934-protein|Name=TCONS_00066934-protein|organism=Clytia hemisphaerica|type=polypeptide|length=477bp
MRNPDSEKTPLINKSGHHVYKLYTRRWFVLAVVALFNVTNAMIWITFAPV
TNFAASYFEISEKSVNYFSLVYFIASLPMGGISWWTIETYGFRFSVILGC
IVNALGGVLRVVGAYSFHGHLRFTIVLVAQILSACVQPFVLSMPTKIAAL
WFGDHERTIANTIATMANPLGVLVANGIAAGIVSKEDDIGLLLIVTGAPA
VITALLAIFGIWSSKPPTPPSPSALIEPVSFFVGIKTILKQKKFMLLALT
SGMGIAAFSSISTIVQQLICPQGYSDTTAGILGALVIVGGFVGAGLSGYY
VDNTRKYIDISKILGILFGFSGSLCLIAVNLRDMVAFNYIAFTLYGLTGL
GVLPVFLELGVECTYPVDEATSSGIQWMIGQVIGAILFFIGLEASPKLSA
ADLADSTCKAEHDIDPLNFSTYAIVVTVLASSIGILFIMFFDTDYKRLQA
ERELDADITDQEPHPNTEDARNIPNII

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041833	XLOC_041833	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066934	TCONS_00066934	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 237..457 e-value: 2.4E-14 score: 52.6
None	No IPR available	GENE3D	1.20.1250.20		coord: 20..223 e-value: 5.0E-18 score: 64.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 457..477
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 36..384 e-value: 3.0E-16 score: 59.2
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 30..391 e-value: 1.48154E-14 score: 72.3465
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 20..447

Blast

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BLAST of TCONS_00066934-protein vs. Swiss-Prot (Human)
Match: MFSD7 (Major facilitator superfamily domain-containing protein 7 OS=Homo sapiens GN=MFSD7 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 7.436e-82
Identity = 163/467 (34.90%), Postives = 253/467 (54.18%), Query Frame = 0

Query:    6 SEKTPLINKSGHHVYKLYTRRWFVLAVVALFNVTNAMIWITFAPVTNFAASYFEISEKSVNYFSLVYFIASLPMGGISWWTIETYGFRFSVILGCIVNALGGVLRVVGAYSFHGHLRFTIVLVAQILSACVQPFVLSMPTKIAALWFGDHERTIANTIATMANPLGVLVANGIAAGIVSKEDDIGLLLIVTGAPAVITALLAIFGIWSSKPPTPPSPSALIEPVSFFV-GIK-TILKQKKFMLLALTSGMGIAAFSSISTIVQQLICPQGYSDTTAGILGALVIVGGFVGAGLSGYYVDNTRKYIDISKILGILFGFSGSLCLIAVNLRDMVAFNYIAFTLYGLTGLGVLPVFLELGVECTYPVDEATSSGIQWMIGQVIGAILFFIGLEASPKLSAADLADSTCKAEHDIDPLNFSTYAIVVTVLASSIGILFIMFFDTDYKRLQAERELDADITDQEPHPNTEDA 470
            +E   L  + GH   + Y RRW  L  ++L N +NA +W++FAPV +  A    +S + +N+ SLVY + S P G  + W +++ G R + ILG  +N  G VLR+V          F  ++  Q L A  Q  V+  P K+AALWF +H+R  AN +ATM+NPLGVLVAN ++  +V K +DI L+L V   PA +  LL+   +W S PPTPPS  A       F+ G+K  ++  K +++LA+  G  I   +S S +++Q++C  G+S   +G+ GAL I  G +GA   G YVD T+ + + +KI   LF  +     +   L+          +L GL G  V PV +EL VEC++PV E  ++G+ +++GQ  G ++       + + S   L  STC  +   DPL+++   +++  L +    +  +FF T Y+RLQAE          EP P+T +A
Sbjct:   12 AEPRALCAQRGH---RTYARRWVFLLAISLLNCSNATLWLSFAPVADVIAEDLVLSMEQINWLSLVYLVVSTPFGVAAIWILDSVGLRAATILGAWLNFAGSVLRMVPCMVVGTQNPFAFLMGGQSLCALAQSLVIFSPAKLAALWFPEHQRATANMLATMSNPLGVLVANVLSPVLVKKGEDIPLMLGVYTIPAGVVCLLSTICLWESVPPTPPSAGAASSTSEKFLDGLKLQLMWNKAYVILAVCLGGMIGISASFSALLEQILCASGHSSGFSGLCGALFITFGILGALALGPYVDRTKHFTEATKIGLCLFSLACVPFALVSQLQGQTLALAATCSLLGLFGFSVGPVAMELAVECSFPVGEGAATGMIFVLGQAEGILIMLAMTALTVRRSEPSL--STC--QQGEDPLDWTVSLLLMAGLCTFFSCILAVFFHTPYRRLQAE--------SGEP-PSTRNA 462

The following BLAST results are available for this feature:

BLAST of TCONS_00066934-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066934-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
MFSD7	7.436e-82	34.90	Major facilitator superfamily domain-containing pr...	[more]

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TCONS_00066934-protein (polypeptide) - C. hemisphaerica

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