TCONS_00066875-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066875-protein
Unique NameTCONS_00066875-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length583

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066875-protein ID=TCONS_00066875-protein|Name=TCONS_00066875-protein|organism=Clytia hemisphaerica|type=polypeptide|length=583bp
LGFWMMSFHEYIKITVRNPRTHISRDKALYTDYEIRIETNNIAFACTDSC
VRRRYSDFQWLRNRLLSQFALERSLPELPPKKVFGRFKRQFLKNRQKGLQ
AFLEDITGQSTYLSDIAVHLFLQTSLSVSEIQDKMTNGTDSGGELLEEYQ
SPSIHGGCTSLSRSCSAYEDHDSGFSYSTASSLNDCVAPHTSCDSTIDGC
DIMNPKDVEQNLSCYADSTEHETTLQSLNPISQEVSGNDTDPDNVSSNYY
FTSDDEGYCCSNYDADDEDNNRVPSLAEDDDDDSLFCFRIKSDHTIYTIN
DAMEILKQRPKLTDRLYCQEDSDDCFRESEYDVIDTDDSDNADIVEVING
TTNNPDTSRIEIKVRAHTLNDEGRLIEVKTTPVRDKNKLKIGKVRSLPGI
RFPIRNGKSKCYRSTSEISLVSAKSQQKLDTVYDELILKESYLTTCTTPT
KSHRSESSDADYLTTINRCYSADSQIDTNIETQTEDTAPTKFFSMLKLNS
KKRKKTIQRLEFQTQDHSSKGRFQVTTVDEVATPENEVKFTLGGKHSLLT
SSTTDEKQLVNGSLKMHNRDLFEHCFLKSYEIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041820XLOC_041820Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066875TCONS_00066875Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 8..125
e-value: 1.1E-17
score: 74.8
IPR001683Phox homologous domainPFAMPF00787PXcoord: 11..124
e-value: 5.0E-23
score: 81.2
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 5..129
e-value: 8.8E-26
score: 90.0
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 11..128
score: 16.442
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 10..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..247

Blast
[Close]
BLAST of TCONS_00066875-protein vs. Swiss-Prot (Human)
Match: SNX11 (Sorting nexin-11 OS=Homo sapiens GN=SNX11 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.018e-24
Identity = 58/137 (42.34%), Postives = 78/137 (56.93%), Query Frame = 0 
Query:    1 LGFWM-MSFH----EYIKITVRNPRTHISRDKALYTDYEIRIETNNIAFACTDSCVRRRYSDFQWLRNRLLSQFALERSLPELPPKKVFGRFKRQFLKNRQKGLQAFLEDITGQSTYLSDIAVHLFLQTSLSVSEIQ 132
            +GFW  MS +    E I + V++PR         Y DY+I + TN+ AF    SCVRRRY +F WLR +L     L   +PELP K  F     +F++ R++GLQ FLE +      LSD  +HLFLQ+ LSV EI+
Sbjct:    1 MGFWCRMSENQEQEEVITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGL-VPVPELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLSVPEIE 136
The following BLAST results are available for this feature:
BLAST of TCONS_00066875-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX115.018e-2442.34Sorting nexin-11 OS=Homo sapiens GN=SNX11 PE=1 SV=... [more]
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