Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00066862-protein ID=TCONS_00066862-protein|Name=TCONS_00066862-protein|organism=Clytia hemisphaerica|type=polypeptide|length=146bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0005509 calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0005509 calcium ion binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
M S Y E D M E E Y R D T F S L F D K Q G D G K I E C G D I G D I L R A L G C N P T Q A E V K K I V A D I D S S G Q K R I T F E E F I P I F H T M S K K K S S C G F E A F S E G F R I F D R D N N G M V S V A E V R H L L T S L G E K L N S S D V D A L V Q G L E D S S G M I N Y E E F V R G V M N A 20 40 60 80 100 120 140 Expect = 2.9 / Score = 14.1 Expect = 3.9 / Score = 13.0 Expect = 0.046 / Score = 22.9 Expect = 1.9E-10 / Score = 41.0 Expect = 4.5E-5 / Score = 23.0 Score = 6.619 Score = 11.026 Score = 12.868 Score = 9.743 Expect = 6.53554E-10 / Score = 50.2389 Expect = 8.74959E-11 / Score = 52.9353 Expect = 6.4E-11 / Score = 41.5 Expect = 1.2E-11 / Score = 44.0 Expect = 2.7E-11 / Score = 42.7 Expect = 5.8E-9 / Score = 35.2 Score = Score = Sequence SM00054 PF13499 PF13405 PS50222 PS50222 PS50222 PS50222 cd00051 cd00051 G3DSA:1.10.238.10 G3DSA:1.10.238.10 G3DSA:1.10.238.10 PS00018 SSF47473
Blast
BLAST of TCONS_00066862-protein vs. Swiss-Prot (Human)
Match:
MYL1 (Myosin light chain 1/3, skeletal muscle isoform OS=Homo sapiens GN=MYL1 PE=2 SV=3)
HSP 1 Score: 145.976 bits (367), Expect = 3.083e-45
Identity = 67/146 (45.89%), Postives = 99/146 (67.81%), Query Frame = 0
Query: 2 SYEDMEEYRDTFSLFDKQGDGKIECGDIGDILRALGCNPTQAEVKKIVADIDSS--GQKRITFEEFIPIFHTMSKKKSSCGFEAFSEGFRIFDRDNNGMVSVAEVRHLLTSLGEKLNSSDVDALVQGLEDSSGMINYEEFVRGVMN 145
S E +E+++ F LFD+ GD KI +GD+LRALG NPT AEV+K++ + + K+I FE+F+P+ +S K +E F EG R+FD++ NG V AE+RH+L +LGEK+ +V+AL+ G EDS+G INYE FV+ +M+
Sbjct: 48 SKEQQDEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMAGQEDSNGCINYEAFVKHIMS 193
The following BLAST results are available for this feature:
BLAST of TCONS_00066862-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M S Y E D M E E Y R D T F S L F D K Q G D G K I E C G D I G D I L R A L G C N P T Q A E V K K I V A D I D S S G Q K R I T F E E F I P I F H T M S K K K S S C G F E A F S E G F R I F D R D N N G M V S V A E V R H L L T S L G E K L N S S D V D A L V Q G L E D S S G M I N Y E E F V R G V M N A 20 40 60 80 100 120 140 Expect = 3.08e-45 / Id = 45.89 Sequence MYL1
Match Name E-value Identity Description
MYL1 3.083e-45 45.89 Myosin light chain 1/3, skeletal muscle isoform OS... [more]
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