TCONS_00066862-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066862-protein
Unique NameTCONS_00066862-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length146

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066862-protein ID=TCONS_00066862-protein|Name=TCONS_00066862-protein|organism=Clytia hemisphaerica|type=polypeptide|length=146bp
MSYEDMEEYRDTFSLFDKQGDGKIECGDIGDILRALGCNPTQAEVKKIVA
DIDSSGQKRITFEEFIPIFHTMSKKKSSCGFEAFSEGFRIFDRDNNGMVS
VAEVRHLLTSLGEKLNSSDVDALVQGLEDSSGMINYEEFVRGVMNA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041815XLOC_041815Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066862TCONS_00066862Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 83..111
e-value: 0.046
score: 22.9
coord: 8..36
e-value: 2.9
score: 14.1
coord: 44..72
e-value: 3.9
score: 13.0
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 8..68
e-value: 1.9E-10
score: 41.0
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 86..112
e-value: 4.5E-5
score: 23.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 129..146
score: 6.619
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 79..114
score: 11.026
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 4..39
score: 12.868
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 40..75
score: 9.743
IPR002048EF-hand domainCDDcd00051EFhcoord: 84..144
e-value: 6.53554E-10
score: 50.2389
IPR002048EF-hand domainCDDcd00051EFhcoord: 8..66
e-value: 8.74959E-11
score: 52.9353
NoneNo IPR availableGENE3D1.10.238.10coord: 107..146
e-value: 6.4E-11
score: 41.5
NoneNo IPR availableGENE3D1.10.238.10coord: 35..71
e-value: 1.2E-11
score: 44.0
NoneNo IPR availableGENE3D1.10.238.10coord: 1..34
e-value: 2.7E-11
score: 42.7
coord: 72..106
e-value: 5.8E-9
score: 35.2
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 92..104
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 2..144

Blast
[Close]
BLAST of TCONS_00066862-protein vs. Swiss-Prot (Human)
Match: MYL1 (Myosin light chain 1/3, skeletal muscle isoform OS=Homo sapiens GN=MYL1 PE=2 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 3.083e-45
Identity = 67/146 (45.89%), Postives = 99/146 (67.81%), Query Frame = 0 
Query:    2 SYEDMEEYRDTFSLFDKQGDGKIECGDIGDILRALGCNPTQAEVKKIVADIDSS--GQKRITFEEFIPIFHTMSKKKSSCGFEAFSEGFRIFDRDNNGMVSVAEVRHLLTSLGEKLNSSDVDALVQGLEDSSGMINYEEFVRGVMN 145
            S E  +E+++ F LFD+ GD KI    +GD+LRALG NPT AEV+K++ +  +     K+I FE+F+P+   +S  K    +E F EG R+FD++ NG V  AE+RH+L +LGEK+   +V+AL+ G EDS+G INYE FV+ +M+
Sbjct:   48 SKEQQDEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMAGQEDSNGCINYEAFVKHIMS 193
The following BLAST results are available for this feature:
BLAST of TCONS_00066862-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYL13.083e-4545.89Myosin light chain 1/3, skeletal muscle isoform OS... [more]
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