TCONS_00066668-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066668-protein
Unique NameTCONS_00066668-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length653

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066668-protein ID=TCONS_00066668-protein|Name=TCONS_00066668-protein|organism=Clytia hemisphaerica|type=polypeptide|length=653bp
MVFDNLRRSLRNTFRRKSKRERGPVSADGKRLLPCSIQLLDGTDVTINLQ
RDALGKDLIKRVLLHLDLVEKDYFALQYMDSKNVPHWIDPVKKVKKQVSI
GPPYSIHFRMKFYPIEPHKLHEELTRYHCFLQIKNDVREGKLKPSLKQSI
EMGAFAVQSELGDFDNTLHVGNYVSEFRLAKNQNEEMEKGVEKKHRLLSG
MNPAECETHYLAIAGNLECYGMDRHLVKGEDGREYTVGLTPHGIVILRGD
QKIGFHIWKSITNITFKQSRFIMCAKTNENETQEYRYELGSPRASKHLWK
CAIEYHTFFRLVAPTEAPERKQGLLTFGSRFRYSGRTLHQADKDNTVNAR
KSNIFKRTRSERFAQRSTIGYIRIGSNVWARAVNGDYYRGVVTALTDKVH
VKFEDGETISHERKEEEALVYDMAPNPNEIKIGTRVIAHWSGVAAYLPGA
VTKIEGNKYQVLYDDGDRLGNRLEQMRILKPPLYFGPGSGRSNLQKKYSM
KTTALIGSSSTSEDGPKRSASVDINRARTPRTPADDDAFFPDRKGSPQVP
RSKSSPAITNRNAPAGGGGSLKSDDQNWNANLSSSSKDPAMKRTQSAPGK
KAHNNNQRNGAAPTRSHSHSSSKGYTVDKNTPALNARLVPNAQTGKSYQI
TDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041703XLOC_041703Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066668TCONS_00066668Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019749Band_41_domain
IPR002999Tudor
IPR018980FERM_PH-like_C
IPR014847FERM-adjacent
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR018979FERM_N
IPR011993PH_dom-like
IPR019748FERM_central
IPR019747FERM_CS
IPR000299FERM_domain
IPR029071Ubiquitin-rel_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019749Band 4.1 domainPRINTSPR00935BAND41coord: 66..78
score: 50.8
coord: 144..164
score: 30.56
coord: 205..221
score: 42.16
coord: 131..144
score: 33.63
IPR019749Band 4.1 domainSMARTSM00295B41_5coord: 29..225
e-value: 4.1E-55
score: 199.1
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 428..484
e-value: 0.46
score: 19.5
coord: 370..420
e-value: 18.0
score: 5.9
IPR018980FERM, C-terminal PH-like domainSMARTSM01196FERM_C_3coord: 229..317
e-value: 1.2E-24
score: 97.9
IPR018980FERM, C-terminal PH-like domainPFAMPF09380FERM_Ccoord: 230..314
e-value: 3.6E-15
score: 56.0
IPR014847FERM adjacent (FA)SMARTSM01195FA_2coord: 322..368
e-value: 5.8E-12
score: 55.7
IPR014847FERM adjacent (FA)PFAMPF08736FAcoord: 324..366
e-value: 1.0E-11
score: 44.6
NoneNo IPR availableGENE3D2.30.30.140coord: 422..481
e-value: 8.5E-9
score: 34.5
NoneNo IPR availableGENE3D2.30.30.140coord: 349..415
e-value: 5.0E-5
score: 22.7
NoneNo IPR availableGENE3D3.10.20.90coord: 32..111
e-value: 1.3E-24
score: 85.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..653
NoneNo IPR availableCDDcd13186FERM_C_NBL4_NBL5coord: 221..310
e-value: 2.32693E-33
score: 122.392
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 112..217
e-value: 7.5E-24
score: 83.7
IPR018979FERM, N-terminalPFAMPF09379FERM_Ncoord: 37..98
e-value: 1.3E-13
score: 50.5
IPR011993PH domain-likeGENE3D2.30.29.30coord: 220..310
e-value: 2.6E-20
score: 72.4
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 218..360
IPR019748FERM central domainPFAMPF00373FERM_Mcoord: 118..225
e-value: 1.1E-14
score: 54.7
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 125..217
e-value: 1.45692E-23
score: 95.0058
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 116..220
IPR019747FERM conserved sitePROSITEPS00660FERM_1coord: 87..116
IPR000299FERM domainPROSITEPS50057FERM_3coord: 33..313
score: 67.609
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 31..114

Blast
[Close]
BLAST of TCONS_00066668-protein vs. Swiss-Prot (Human)
Match: E41L5 (Band 4.1-like protein 5 OS=Homo sapiens GN=EPB41L5 PE=1 SV=3)

HSP 1 Score: 338.576 bits (867), Expect = 1.719e-106
Identity = 160/377 (42.44%), Postives = 237/377 (62.86%), Query Frame = 0 
Query:    6 LRRSL-RNTFRRKSKRERG----------PVSADGKRLLPCSIQLLDGTDVTINLQRDALGKDLIKRVLLHLDLVEKDYFALQYMDSKNVPHWIDPVKKVKKQVSIGPPYSIHFRMKFYPIEPHKLHEELTRYHCFLQIKNDVREGKLKPSLKQSIEMGAFAVQSELGDFDNTLHVGNYVSEFRLAKNQNEEMEKGVEKKHRLLSGMNPAECETHYLAIAGNLECYGMDRHLVKGEDGREYTVGLTPHGIVILRGDQKIGFHIWKSITNITFKQSRFIMCAKTNENETQE----YRYELGSPRASKHLWKCAIEYHTFFRLVAPTEAPERKQGLLTFGSRFRYSGRTLHQADKDNTVNARKSNIFKRTRSERFAQRS 367
             RR+L R + R+ +++ER           P + D K ++ C + LLDGTDV+++L + A G++L  +++ HLDL+E DYF L++MDS  V HW+D  K +KKQV IG PY +H R+KFY  EP+ L EELTRY   LQ+K D+  GKL      ++++ A+ +Q+ELGD+D   H    VSEFR    Q EEME  + +K +   G  PA+ ET+YL  A  LE YG+D H+VK  DG +Y++GLTP G+++  GD KIG   W  IT + FK+++  +    ++++ +E    + + L  P+A KHLWKCA+E+H FFRL  P +    + G +  GSRFRYSG+T +Q  K N   AR+S  F+R  S+R+++R+
Sbjct:    5 FRRTLGRRSMRKHAEKERLREAQRAATHIPAAGDSKSIITCRVSLLDGTDVSVDLPKKAKGQELFDQIMYHLDLIESDYFGLRFMDSAQVAHWLDGTKSIKKQVKIGSPYCLHLRVKFYSSEPNNLREELTRYLFVLQLKQDILSGKLDCPFDTAVQLAAYNLQAELGDYDLAEHSPELVSEFRFVPIQTEEMELAIFEKWKEYRGQTPAQAETNYLNKAKWLEMYGVDMHVVKARDGNDYSLGLTPTGVLVFEGDTKIGLFFWPKITRLDFKKNKLTLVVVEDDDQGKEQEHTFVFRLDHPKACKHLWKCAVEHHAFFRLRGPVQKSSHRSGFIRLGSRFRYSGKTEYQTTKTN--KARRSTSFERRPSKRYSRRT 379
The following BLAST results are available for this feature:
BLAST of TCONS_00066668-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
E41L51.719e-10642.44Band 4.1-like protein 5 OS=Homo sapiens GN=EPB41L5... [more]
back to top