Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00066533-protein ID=TCONS_00066533-protein|Name=TCONS_00066533-protein|organism=Clytia hemisphaerica|type=polypeptide|length=763bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0005044 scavenger receptor activity GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor GO:0005507 copper ion binding
Vocabulary: Cellular Component
Term Definition
GO:0016020 membrane
Vocabulary: Biological Process
Term Definition
GO:0055114 oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0055114 oxidation-reduction process
cellular_component
GO:0016020 membrane
molecular_function
GO:0005507 copper ion binding
molecular_function
GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
molecular_function
GO:0005044 scavenger receptor activity
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
100 200 300 400 500 600 700 Score = 52.93 Score = 54.67 Expect = 8.0E-17 / Score = 60.0 Expect = 1.3E-18 / Score = 66.5 Score = 39.84 Score = 66.04 Score = 66.38 Score = 42.52 Score = 59.36 Expect = 1.8E-12 / Score = 47.5 Expect = 3.2E-10 / Score = 40.3 Expect = 9.8E-26 / Score = 90.1 Expect = 4.4E-16 / Score = 59.1 Score = Score = 14.859 Score = 27.869 Score = 19.058 Score = 14.525 Score = 36.0 Score = 40.91 Score = 59.52 Score = 30.43 Score = 60.0 Score = 50.0 Expect = 6.4E-75 / Score = 251.2 Expect = 6.0E-9 / Score = 45.7 Expect = 7.7E-5 / Score = 18.5 Expect = 3.0E-40 / Score = 149.7 Expect = 3.4E-18 / Score = 76.4 Expect = 9.3E-14 / Score = 51.0 Expect = 9.2E-14 / Score = 51.0 Expect = 7.2E-21 / Score = 73.9 Score = Score = Score = Score = Expect = 1.5E-13 / Score = 61.0 Expect = 2.0E-16 / Score = 59.0 Expect = 2.1E-13 / Score = 50.2 Score = 17.009 Expect = 5.40397E-11 / Score = 58.0858 Score = Score = Sequence PR00013 G3DSA:1.20.5.950 G3DSA:4.10.790.10 PR00258 PF00530 PS00420 PS50287 PS50287 PS50287 PS50287 PR00074 PF01186 SM00202 G3DSA:3.10.250.10 SSF56487 SSF56487 SSF56487 SSF56487 SM00059 G3DSA:2.10.10.10 PF00040 PS51092 cd00062 PS00926 SSF57440
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PRINTS PR00013 FNTYPEII coord: 703..712 None No IPR available GENE3D 1.20.5.950 coord: 277..322 None No IPR available GENE3D 4.10.790.10 coord: 323..373 IPR001190 SRCR domain PRINTS PR00258 SPERACTRCPTR coord: 294..305 IPR001190 SRCR domain PFAM PF00530 SRCR coord: 33..135 IPR001190 SRCR domain PROSITE PS00420 SRCR_1 coord: 280..317 IPR001190 SRCR domain PROSITE PS50287 SRCR_2 coord: 27..136 IPR001190 SRCR domain PROSITE PS50287 SRCR_2 coord: 275..374 IPR001190 SRCR domain PROSITE PS50287 SRCR_2 coord: 384..482 IPR001190 SRCR domain PROSITE PS50287 SRCR_2 coord: 153..260 IPR001695 Lysyl oxidase PRINTS PR00074 LYSYLOXIDASE coord: 542..563 IPR001695 Lysyl oxidase PFAM PF01186 Lysyl_oxidase coord: 486..688 IPR017448 SRCR-like domain SMART SM00202 SR_3 coord: 27..136 IPR017448 SRCR-like domain GENE3D 3.10.250.10 coord: 150..270 IPR017448 SRCR-like domain SUPERFAMILY 56487 SRCR-like coord: 149..259 IPR017448 SRCR-like domain SUPERFAMILY 56487 SRCR-like coord: 26..136 IPR017448 SRCR-like domain SUPERFAMILY 56487 SRCR-like coord: 380..489 IPR017448 SRCR-like domain SUPERFAMILY 56487 SRCR-like coord: 273..375 IPR000562 Fibronectin, type II, collagen-binding SMART SM00059 FN2_2 coord: 699..759 IPR000562 Fibronectin, type II, collagen-binding GENE3D 2.10.10.10 coord: 693..760 IPR000562 Fibronectin, type II, collagen-binding PFAM PF00040 fn2 coord: 706..759 IPR000562 Fibronectin, type II, collagen-binding PROSITE PS51092 FN2_2 coord: 701..761 IPR000562 Fibronectin, type II, collagen-binding CDD cd00062 FN2 coord: 700..759 IPR019828 Lysyl oxidase, conserved site PROSITE PS00926 LYSYL_OXIDASE coord: 560..573 IPR013806 Kringle-like fold SUPERFAMILY 57440 Kringle-like coord: 697..761
Blast
BLAST of TCONS_00066533-protein vs. Swiss-Prot (Human)
Match:
LOXL2 (Lysyl oxidase homolog 2 OS=Homo sapiens GN=LOXL2 PE=1 SV=1)
HSP 1 Score: 367.851 bits (943), Expect = 7.184e-116
Identity = 233/686 (33.97%), Postives = 348/686 (50.73%), Query Frame = 0
Query: 36 NEGILVVEENGSLKFTCSNYWGAQNSKVLCRELGYRKHLATNSKRASSIRTLRGHQKTFYPFDVTCESNEKTLTECHR--------KYVKNVNIERHCGANSYVYIQCDSQIE---ERDNRTLEDPFNVRLINKNVVQGPVSSGYLHISSSSSDGEGRLASVCIDDWSDASSLVACKNTGFSKVKKFTSSVYNDIDSN-EMAFLRFR--CHGNESILEQCKHETTEFCTNNEIVFLECGTEDENAVITELNGEI--------------------RVRGGAYPSVGRVEVFDGQQWGTICDDQWDLFDANVVCQQLGFGSAIEATHWADNGEGLGNILLTNVACNGTEKHLKDCIHSMDTSPCTHREDAGVRCRRPFVNHKMRIKLVGGKKPTEGRIEFLDSKNE---WSGICGIGFGRSEGEVVCRQLGLDFVKWAGRSYKY---GLNYRKR-MFDVRCKGSESELSECSY-SDYSRCRYYDM---ASVICTQYAPDLVMDIRLFKQSIKVDTHPLHHLRCSFEERCLSPEVDNIWGRSGFHNRHLLKFTSRFLNKGAVTFRPHIDKSSWQWHQCHEHYHSMETFAIYDLIDNNGYRIAHGQKASFCLEDSDCEPGYKKNFNCTDKGDQGITVNCADNYSNRIDCQWIDVTNVPFGNYSLRVDANPLRNVTESDWLNNRAVCEIGY 676
+EG + V +G C + + + V+CRELGY +K ++ + + + ++ C NE TL C K+ ++V + C + D+ + E N +ED +++ + PV GY+ + + +C W+ +S V C GF + + + VY S + + F C G E+ + CK + V E G AV++ + G++ R+RGGAY GRVEV +WGT+CDD+WDL A+VVC++LGFGSA EA + G+G+G I L + C G EK + DC + ++ C H EDAGVRC P + + +++L GG+ P EGR+E L +N W +CG +G E VVCRQLGL F A + Y +N K M V+C G+E L+ C + + C + A V C++ APDLV++ + +Q+ ++ P+ L+C+ EE CLS +G+ R LL+F+S+ N G FRP + +W WH CH HYHSME F YDL++ NG ++A G KASFCLED++CE +KN+ C + GDQGIT+ C D Y + IDCQW+D+T+VP G+Y +V NP V ESD+ NN C Y
Sbjct: 68 SEGRVEVYYDGQWGTVCDDDFSIHAAHVVCRELGY-----VEAKSWTASSSYGKGEGPIWLDNLHCTGNEATLAACTSNGWGVTDCKHTEDVGVV--CSDKRIPGFKFDNSLINQIENLNIQVEDIRIRAILSTYRKRTPVMEGYVEVKEGKT-----WKQICDKHWTAKNSRVVCGMFGFPGERTYNTKVYKMFASRRKQRYWPFSMDCTGTEAHISSCKLGPQVSLDPMKNVTCENGLP---AVVSCVPGQVFSPDGPSRFRKAYKPEQPLVRLRGGAYIGEGRVEVLKNGEWGTVCDDKWDLVSASVVCRELGFGSAKEAVTGSRLGQGIGPIHLNEIQCTGNEKSIIDCKFNAESQGCNHEEDAGVRCNTPAMGLQKKLRLNGGRNPYEGRVEVLVERNGSLVWGMVCGQNWGIVEAMVVCRQLGLGFASNAFQETWYWHGDVNSNKVVMSGVKCSGTELSLAHCRHDGEDVACPQGGVQYGAGVACSETAPDLVLNAEMVQQTTYLEDRPMFMLQCAMEENCLSASAAQTDPTTGY--RRLLRFSSQIHNNGQSDFRPKNGRHAWIWHDCHRHYHSMEVFTHYDLLNLNGTKVAEGHKASFCLEDTECEGDIQKNYECANFGDQGITMGCWDMYRHDIDCQWVDITDVPPGDYLFQVVINPNFEVAESDYSNNIMKCRSRY 736
The following BLAST results are available for this feature:
BLAST of TCONS_00066533-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M R K S L F L Y W N I F L V L C F V L Q I H C K Q T Y S L I G N K G S N E G I L V V E E N G S L K F T C S N Y W G A Q N S K V L C R E L G Y R K H L A T N S K R A S S I R T L R G H Q K T F Y P F D V T C E S N E K T L T E C H R K Y V K N V N I E R H C G A N S Y V Y I Q C D S Q I E E R D N R T L E D P F N V R L I N K N V V Q G P V S S G Y L H I S S S S S D G E G R L A S V C I D D W S D A S S L V A C K N T G F S K V K K F T S S V Y N D I D S N E M A F L R F R C H G N E S I L E Q C K H E T T E F C T N N E I V F L E C G T E D E N A V I T E L N G E I R V R G G A Y P S V G R V E V F D G Q Q W G T I C D D Q W D L F D A N V V C Q Q L G F G S A I E A T H W A D N G E G L G N I L L T N V A C N G T E K H L K D C I H S M D T S P C T H R E D A G V R C R R P F V N H K M R I K L V G G K K P T E G R I E F L D S K N E W S G I C G I G F G R S E G E V V C R Q L G L D F V K W A G R S Y K Y G L N Y R K R M F D V R C K G S E S E L S E C S Y S D Y S R C R Y Y D M A S V I C T Q Y A P D L V M D I R L F K Q S I K V D T H P L H H L R C S F E E R C L S P E V D N I W G R S G F H N R H L L K F T S R F L N K G A V T F R P H I D K S S W Q W H Q C H E H Y H S M E T F A I Y D L I D N N G Y R I A H G Q K A S F C L E D S D C E P G Y K K N F N C T D K G D Q G I T V N C A D N Y S N R I D C Q W I D V T N V P F G N Y S L R V D A N P L R N V T E S D W L N N R A V C E I G Y F N R D D I I V R G C T T D P C Y Q E S F G G N S F G H C C Q F P F V Y N G Q L H Y Q C I Q K N N S S E N N G N N S E L N N E N R S W C S T T N D F D Q D G K W G Y C S E K I 100 200 300 400 500 600 700 Expect = 7.18e-116 / Id = 33.97 Sequence LOXL2
Match Name E-value Identity Description
LOXL2 7.184e-116 33.97 Lysyl oxidase homolog 2 OS=Homo sapiens GN=LOXL2 P... [more]
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