TCONS_00066440-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066440-protein
Unique Name	TCONS_00066440-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	493

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066440-protein ID=TCONS_00066440-protein|Name=TCONS_00066440-protein|organism=Clytia hemisphaerica|type=polypeptide|length=493bp
MGTGSSVPLDNGKESRNKKQSNIRSQFKKEFGTIKKDDLVEDDFNNNDNL
PDEKXDLVEDDFNNNDNLPDEKEPTSSQQLGDVDNRKFVVVGGSKLKNTN
INPSVFKARRIFLKPITKSKASEQNLVIKKPTNGALLKELYKRMDPSVNK
LSVRSIVGEAEVAIKYNVSERCLLVKIGRAKGLHADDLRFPSPFIIVDLY
QRSTPNEKLTQQTRTKNSTCNPIFQEILIFPMGEESIANSHLKISIWDKI
SGRDNDFLGETVVDLCKLNLNSGNLLWYKLKPQTDVTITGDLDVTLTFDP
SINNLKVLLHSANNVKVADNNGATSFPYVRVYVTGIPAKQESKVMKETLN
PEWEELFEFDVHAEEFSRRIVILTVLSENQNGGKAISLGDVHIPLVNLTP
DDWGVRKTYPLEDLRNAPYVRSKWSEEGISMEFKEAMKAHAIYGYPKFLF
KDQHQGKMVVSCYSEKARTQAKMVISNGRPTFEEVQILSLRHY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041567	XLOC_041567	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066440	TCONS_00066440	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 304..410 e-value: 1.2E-9 score: 48.0 coord: 172..277 e-value: 6.6E-14 score: 62.2
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 288..419 e-value: 2.0E-22 score: 78.8
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 304..399 e-value: 4.6E-12 score: 46.0 coord: 173..280 e-value: 3.2E-13 score: 49.8
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 147..287 e-value: 2.2E-24 score: 85.4
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 303..392 score: 12.898
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 173..262 score: 12.81
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 155..284
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 285..418
None	No IPR available	CDD	cd00030	C2	coord: 305..411 e-value: 4.25504E-15 score: 70.1735

Blast

[Close]

BLAST of TCONS_00066440-protein vs. Swiss-Prot (Human)
Match: SYT7 (Synaptotagmin-7 OS=Homo sapiens GN=SYT7 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 8.691e-23
Identity = 73/233 (31.33%), Postives = 119/233 (51.07%), Query Frame = 0

Query:  154 RSIVGEAEVAIKYNVSERCLLVKIGRAKGLHADDLRFPS-PFIIVDLYQRSTPNEKLTQQTRTKNSTCNPIFQEILIFP-MGEESIANSHLKISIWDKISGRDNDFLGETVVDLCKLNLNSGNLLWYKLKPQTDVTIT-GDLDVTLTFDPSINNLKVLLHSANNVKVADNNGATSFPYVRVYVTGIPAKQESK---VMKETLNPEWEELFEFDVHAEEFSRRIVILTVLSENQ 380
            R  +G  + ++ YN  E  L VKI +A+ L A D    S PF+ + L     P++K   +T+ K    NP + E  +F     E +    L + + D      ND +GE  + L K++L      W  LKP +D + + G+L ++L ++PS N++ V +  A N+K  D  G TS PYV+V++     + E K    MK  LNP + E F FD+  E+     +I+TV+ +++
Sbjct:  133 RENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLL----PDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPCSDGSGSRGELLLSLCYNPSANSIIVNIIKARNLKAMDI-GGTSDPYVKVWLMYKDKRVEKKKTVTMKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK 360

The following BLAST results are available for this feature:

BLAST of TCONS_00066440-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066440-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
SYT7	8.691e-23	31.33	Synaptotagmin-7 OS=Homo sapiens GN=SYT7 PE=1 SV=3	[more]

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TCONS_00066440-protein (polypeptide) - C. hemisphaerica

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