TCONS_00066426-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066426-protein
Unique NameTCONS_00066426-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length539

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066426-protein ID=TCONS_00066426-protein|Name=TCONS_00066426-protein|organism=Clytia hemisphaerica|type=polypeptide|length=539bp
MVMGSPNAEGSVQTVSTLALAEAAHREYQAGNYESAEKLCMQWWRRETDS
TGCLLLLSSIHFQCRRLDQSAQFSQLAIKQNPMLAEAFSNLGNVLKEKGQ
VKDALANYRHAVKLKPDFIDGYINLAAALVTAGDLEGAVQAYATALNYNP
ELYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQ
GEIWLAIHHFEKAVQIDQNFLDAYINLGNVLKEARIFDRAVTAYLRALTI
NPNHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPDAYCNLANALK
EQGKVEESEECYNTALTLCPSHADSLNNLANIKREQGKIEDSIGLYMKAL
QVFPEFAAAHSNLASILQQQGKLHEALMHYKDAIRIHPTFADAYSNMGNA
LKEMQDIQGAIQCYTRAIQINPGFADAHSNLASVYKDSGNIAEAIQSYRT
ALKLKPEFPDAYCNLAHCLQIICDWNDYDNRMKKLLTIVDDQLGKNRLPS
VHPHHTMLYPLSPQQRKAIANRHGNLCLDKVCNDWFSIT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041563XLOC_041563Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066426TCONS_00066426Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR001440TPR_1
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450500Score = Score = Score = 103.512SequenceSM00028PF13181PS50005PS50005PS50005PS50005PS50005PS50005PS50005PS50005PS50005PS50005PS50005G3DSA:1.25.40.10G3DSA:1.25.40.10G3DSA:1.25.40.10G3DSA:1.25.40.10G3DSA:1.25.40.10G3DSA:1.25.40.10SSF48452SSF48452PF13414PF00515PS50293
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 255..288
e-value: 9.4E-7
score: 38.4
coord: 119..152
e-value: 0.034
score: 23.3
coord: 425..458
e-value: 5.6E-7
score: 39.2
coord: 221..254
e-value: 1.2E-4
score: 31.5
coord: 85..118
e-value: 1.2E-5
score: 34.8
coord: 187..220
e-value: 1.3E-5
score: 34.7
coord: 289..322
e-value: 1.2E-7
score: 41.4
coord: 153..186
e-value: 7.3E-4
score: 28.8
coord: 357..390
e-value: 1.7E-5
score: 34.3
coord: 323..356
e-value: 4.7E-4
score: 29.5
coord: 391..424
e-value: 5.0E-8
score: 42.7
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 222..254
e-value: 0.0096
score: 16.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 357..390
score: 9.706
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 391..424
score: 11.564
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 153..186
score: 8.378
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 85..118
score: 11.505
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 255..288
score: 10.473
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 187..220
score: 9.735
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 289..322
score: 9.617
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 425..458
score: 11.712
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 119..152
score: 9.411
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 221..254
score: 11.151
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 323..356
score: 8.437
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 6..98
e-value: 1.4E-12
score: 47.1
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 221..274
e-value: 2.0E-21
score: 75.4
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 99..140
e-value: 1.9E-13
score: 49.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 399..433
e-value: 1.5E-15
score: 56.4
coord: 195..220
e-value: 1.8E-9
score: 36.9
coord: 300..333
e-value: 3.2E-14
score: 52.2
coord: 368..398
e-value: 1.4E-13
score: 50.1
coord: 275..299
e-value: 2.0E-13
score: 49.6
coord: 334..367
e-value: 6.9E-12
score: 44.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 434..533
e-value: 5.7E-18
score: 64.5
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 141..194
e-value: 1.5E-15
score: 56.6
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 29..321
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 290..471
NoneNo IPR availablePFAMPF13414TPR_11coord: 434..467
e-value: 2.1E-10
score: 40.0
coord: 160..201
e-value: 8.8E-8
score: 31.6
coord: 264..303
e-value: 3.0E-12
score: 45.9
coord: 92..130
e-value: 1.1E-8
score: 34.6
coord: 331..371
e-value: 8.4E-7
score: 28.5
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 391..424
e-value: 9.9E-10
score: 37.7
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 17..492
score: 103.512

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066426-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MVMGSPNAEGSVQTVSTLALAEAAHREYQAGNYESAEKLCMQWWRRETDSTGCLLLLSSIHFQCRRLDQSAQFSQLAIKQNPMLAEAFSNLGNVLKEKGQVKDALANYRHAVKLKPDFIDGYINLAAALVTAGDLEGAVQAYATALNYNPELYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQIDQNFLDAYINLGNVLKEARIFDRAVTAYLRALTINPNHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPDAYCNLANALKEQGKVEESEECYNTALTLCPSHADSLNNLANIKREQGKIEDSIGLYMKALQVFPEFAAAHSNLASILQQQGKLHEALMHYKDAIRIHPTFADAYSNMGNALKEMQDIQGAIQCYTRAIQINPGFADAHSNLASVYKDSGNIAEAIQSYRTALKLKPEFPDAYCNLAHCLQIICDWNDYDNRMKKLLTIVDDQLGKNRLPSVHPHHTMLYPLSPQQRKAIANRHGNLCLDKVCNDWFSIT50100150200250300350400450500Expect = 0.00e+0 / Id = 82.10SequenceOGT1
Match NameE-valueIdentityDescription
OGT10.000e+082.10UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
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