TCONS_00066248-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066248-protein
Unique Name	TCONS_00066248-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	409

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066248-protein ID=TCONS_00066248-protein|Name=TCONS_00066248-protein|organism=Clytia hemisphaerica|type=polypeptide|length=409bp
MKSTLFLFCFGFGLGHLVFTQDKTKESEQCPNGHCSDGEEHEKMKYTKKG
NKWQKYLDLIEKANKNYKECSTDDCYRLQRRSDFKNWMERGISEELFVKA
KERNIGVHYQVIDGKLYRQDHCIFESRCNGNEHFILKIIKHLPNMEFIIN
THDWPKVRKWDENLPVFSFSKTPDERDILYPAWTFWEGGPAVWPIFPTGL
GRWDLMSEALHKTAQKWTWDRKHSIAFFRGSRTSHERDPLILLSRDKPHI
ADARYTKNQSWRSKKDSLDMDPVEPVTMETHCHYKYLFNFRGVAASFRFK
HLFLCKSLVFHVGKDWTEFFYGEMKPWVHFIPLSVDLKNIEELLEFARQN
DEIAQQIMNRGHNFIIKHLRMTDIENYWLKTLKRYASLVKWEVKKDPKLK
EILPKEDLS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041456	XLOC_041456	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066248	TCONS_00066248	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006598	LipoPS_modifying

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006598	Lipopolysaccharide-modifying protein	SMART	SM00672	cap10	coord: 141..392 e-value: 6.5E-80 score: 281.5
IPR006598	Lipopolysaccharide-modifying protein	PFAM	PF05686	Glyco_transf_90	coord: 77..405 e-value: 8.2E-91 score: 304.7

Blast

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BLAST of TCONS_00066248-protein vs. Swiss-Prot (Human)
Match: PGLT1 (Protein O-glucosyltransferase 1 OS=Homo sapiens GN=POGLUT1 PE=1 SV=1)

HSP 1 Score: 416.772 bits (1070), Expect = 9.030e-145
Identity = 193/361 (53.46%), Postives = 255/361 (70.64%), Query Frame = 0

Query:   48 KKGNKWQKYLDLIEKANKNYKECSTDDC--YRLQRRSDFKNWMERGISEELFVKAKERNIGVHYQVIDGKLYRQDHCIFESRCNGNEHFILKIIKHLPNMEFIINTHDWPKVRKWDE-NLPVFSFSKTPDERDILYPAWTFWEGGPAVWPIFPTGLGRWDLMSEALHKTAQKWTWDRKHSIAFFRGSRTSHERDPLILLSRDKPHIADARYTKNQSWRSKKDSLDMDPVEPVTMETHCHYKYLFNFRGVAASFRFKHLFLCKSLVFHVGKDWTEFFYGEMKPWVHFIPLSVDLKNIEELLEFARQNDEIAQQIMNRGHNFIIKHLRMTDIENYWLKTLKRYASLVKWEVKKDPKLKEILPK 405
            + G+KW+ ++D I ++ +NY+ CS+ +C  Y      D       GIS ++  +   R +G HYQ+   +LYR++ C+F SRC+G EHFIL++I  LP+ME +IN  D+P+V KW E  +PVFSFSKT +  DI+YPAWTFWEGGPAVWPI+PTGLGRWDL  E L ++A +W W +K+S A+FRGSRTS ERDPLILLSR  P + DA YTKNQ+W+S KD+L     + V +  HC YKYLFNFRGVAASFRFKHLFLC SLVFHVG +W EFFY ++KPWVH+IP+  DL N++ELL+F + ND++AQ+I  RG  FI  HL+M DI  YW   L  Y+  + + V +     +I+PK
Sbjct:   27 ESGSKWKVFIDQINRSLENYEPCSSQNCSCYHGVIEEDLTP-FRGGISRKMMAEVVRRKLGTHYQITKNRLYRENDCMFPSRCSGVEHFILEVIGRLPDMEMVINVRDYPQVPKWMEPAIPVFSFSKTSEYHDIMYPAWTFWEGGPAVWPIYPTGLGRWDLFREDLVRSAAQWPWKKKNSTAYFRGSRTSPERDPLILLSRKNPKLVDAEYTKNQAWKSMKDTLGKPAAKDVHLVDHCKYKYLFNFRGVAASFRFKHLFLCGSLVFHVGDEWLEFFYPQLKPWVHYIPVKTDLSNVQELLQFVKANDDVAQEIAERGSQFIRNHLQMDDITCYWENLLSEYSKFLSYNVTRRKGYDQIIPK 386

The following BLAST results are available for this feature:

BLAST of TCONS_00066248-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066248-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
PGLT1	9.030e-145	53.46	Protein O-glucosyltransferase 1 OS=Homo sapiens GN...	[more]

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TCONS_00066248-protein (polypeptide) - C. hemisphaerica

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