TCONS_00066138-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066138-protein
Unique NameTCONS_00066138-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1352

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066138-protein ID=TCONS_00066138-protein|Name=TCONS_00066138-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1352bp
MRQKSMNDKNKNTVSMAGDEMDLDDLLDDEGWDLLNSLTDEELLQLNADF
DPENSLVPVSDRTGLVAAKNAGPMFNQEDLVQGLNKMVESSKTVFKNEKI
RQKEEKKKKEKEERLKKQYSRDKPKLNREPTVELTAEEEELLEAATEEEL
IEAAALLKMNGILTNEQINSVWAGEKPTGSLSKNTSVKGAEIKKERRVAP
KDEETELDVVALNKNIKEDSDAMFYLCINNQPRLEKKIKKTIIDSVRTSK
KMKHLSLAMIGLIDFEVKELAEAIRINTKLETINLESNVITQHGLAPLMK
EIARHPNIREVKIANQKQPFGGNGEECMATAIDQNENILKFGYSFKAPGP
RNKADRAIIRHNEALRQKRRQGEDVYDLKAVCKIRDPWPQPWIKVKNRRG
LGGLIESKAEQMGSKIDLENDTRRESRGSDLRNAVAKPLNINDLLAQRKA
KLKGSKVEELEAERERKQKELFKQMNEQDKAEKDDSDPNNNEDAESKSTN
GSGNILDCLVGKYLKDETTXSGNILDSLVGKYLKDETTDTPPVENQKKVE
EKKKTSGVKIASIEDDNTSRRRRKKSEDEEEGIDFGDFEAEEEEDQEDEE
DKEPEKVEEKKPAPKTSGVKIASLDSDDNKIGRRRRKKSESEDEGGLDFG
EFEEKEEQQIEEKEDEKIEEKAPMKPAVKIASLDNEDSSKIGRRRRKKSE
SEDEGGLDFGEFEEKKEEKEKEEEEEEKVEEVKEEKKSIKKEEPKKPAIK
IASLQEEKTSISRRRRKKSEEEDEGGLDFGAFEEKEEKKVVKETKEEPKV
EPEVKKEEPKPVKKEEPKKPAVKIASLQQDDTSVTRRRRRKKSEDEEEGL
DFGAFEEKKEEKAPEPEPEPEPVEKVEEPKKKVEEKPKEEPKKDDWRSKL
GKVKIAALNDEESKRPMRRRKEKMFEDEEEEPVADVTQEKVEEEVEEKEE
EKVTGKVKPIKIEEEPEEPGRVRRRSKMSKEEEEKYDPFSGVSKNIAKLD
EPATTIARRRRKKYGEDEEEEGVDIFERAAEERRREEEKAKKEKEEKEEA
ERKKKLDEQRAKLADVEARKKKLSLEGGRKVVAKLEEEEAVPRRRKKMYE
WEDEDETTTKPSEQEKKKEEESEEEEESSDEEEKKKAAEEEERKRKESEK
RKIASLPEPETAPRRRKTTKEKMEEDKVDPFAEIEKTELNAVRNAAKNLK
GLPPPDTSVRRRRRNRDEEEKYDPFATAEKKSELEPAKSPEPEPVADDAA
TRRARRQREREEREKEEEAAAEADRKARRERRAKEREEREQKEKEEEEAK
KKKEKEEKEKEKGKWFTDEETKSGDRGADIFDDDDGEPKKLSLRERMARQ
RR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041406XLOC_041406Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066138TCONS_00066138Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 450..484
NoneNo IPR availableCOILSCoilCoilcoord: 751..771
NoneNo IPR availableCOILSCoilCoilcoord: 1251..1314
NoneNo IPR availableCOILSCoilCoilcoord: 1023..1076
NoneNo IPR availableCOILSCoilCoilcoord: 101..129
NoneNo IPR availableCOILSCoilCoilcoord: 1114..1151
NoneNo IPR availableCOILSCoilCoilcoord: 707..742
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 214..369
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 211..500
e-value: 4.7E-9
score: 34.4

Blast
[Close]
BLAST of TCONS_00066138-protein vs. Swiss-Prot (Human)
Match: TMOD3 (Tropomodulin-3 OS=Homo sapiens GN=TMOD3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.775e-27
Identity = 103/346 (29.77%), Postives = 168/346 (48.55%), Query Frame = 0 
Query:   34 LLNSLTDEELLQLNA---DFDPENSLVPVSDRTGLVAAKNAGPMFNQEDLVQGLNKMVESSKTVFKNEKIRQK--EEKKKKEKEERLKKQYSRDKP-KLNREPTVELTAEEEELLEAATEEELIEAAALLKMNGILTNEQINSVWAGEKPTGSLSKNTSVKGAEIKKERRVAPKDEETELDVVALNKNIKEDSDAMFYLCINNQPRLEKKIKKTIIDSVRTSKKMKHLSLAMIGLIDFEVKELAEAIRINTKLETINLESNVITQHGLAPLMKEIARHPNIREVKIANQKQPFGGNGEECMATAIDQNENILKFGYSFKAPGPRNKADRAIIRHNEALRQKRRQGE 373
            LL +L++ EL QL     D DPEN+L+P   R     +K+    F++E L+  L K           E +  K  E+      E++ K    + KP +   E  V L  E EE L +A++ EL + AA+L M+ ++TN +  ++            +  VKG +I       P     E  +    K  KE+   +  + +NN   +     K    ++ T+  +K  SLA     D      AE +++N  L+++N+ESN IT  G+  L+  +  +  + E+KI NQ+Q  G   E  MA  +++N NILKFGY F   GPR +A  AI ++N+ +R++R +G+
Sbjct:   20 LLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEK-----------EALEHKDREDYVPYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVFDEPPNPTNVEESL----KRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFITGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLVRKRRVEGD 350
The following BLAST results are available for this feature:
BLAST of TCONS_00066138-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMOD32.775e-2729.77Tropomodulin-3 OS=Homo sapiens GN=TMOD3 PE=1 SV=1[more]
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