TCONS_00066015-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066015-protein
Unique NameTCONS_00066015-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length218

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066015-protein ID=TCONS_00066015-protein|Name=TCONS_00066015-protein|organism=Clytia hemisphaerica|type=polypeptide|length=218bp
MISRRLLNSVTYGRLISRQLAKQRCISTTSAWWNSKEEQNEDAELEHNPY
FEKYADKIKKVQNEAKQYGNKTFHGDARLKRETERWKRSIQSVEEKLSKK
KKEQEDKRGSKLPSRLDELIHLDLLQSKTADEISHIWTEHFKDQTAISAI
IPAESFKEMSTRAEEFPTFLYPLPKENGYEFVLSQFXNSQPFYTLYLKKM
GTSLYYPNLKVTDAFSLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041338XLOC_041338Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066015TCONS_00066015Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010591ATP11
Vocabulary: Biological Process
TermDefinition
GO:0006461protein complex assembly
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006461 protein complex assembly
cellular_component GO:0005739 mitochondrion
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..71
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
IPR010591ATP11PFAMPF06644ATP11coord: 50..190
e-value: 4.8E-22
score: 78.9

Blast
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BLAST of TCONS_00066015-protein vs. Swiss-Prot (Human)
Match: ATPF1 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Homo sapiens GN=ATPAF1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 8.893e-20
Identity = 51/162 (31.48%), Postives = 89/162 (54.94%), Query Frame = 0 
Query:   42 DAELEHNPYFEKYADKIKKVQNEAKQYGNKTFHGDARLKRETE---------RWKRSIQSVEEKLSKKKKEQEDKRGSKLPSRLDELIHLDLLQSKTADEISHIWTEHFKDQTAISAIIPAESFKEMSTRAEEFPTFLYPLPKENGYEFVLSQFXNSQPFYT 194
            +AEL+ NP++++Y DKI+ +    ++     F  ++RL++ +E         R    I+ VE+K     K Q   RG      L  + ++++++ KTA+EI  IW ++F  +  + A+IPAE F  +  RA+  PTFL  LP+  GYEF + Q+  ++  +T
Sbjct:   68 EAELQANPFYDRYRDKIQLL----RRSDPAAF--ESRLEKRSEFRKQPVGHSRQGDFIKCVEQKTDALGK-QSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFT 222
The following BLAST results are available for this feature:
BLAST of TCONS_00066015-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATPF18.893e-2031.48ATP synthase mitochondrial F1 complex assembly fac... [more]
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