TCONS_00065890-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065890-protein
Unique Name	TCONS_00065890-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1350

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065890-protein ID=TCONS_00065890-protein|Name=TCONS_00065890-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1350bp
MSDEEESYDGLDDGTEDEDELLDWQLQLCFMKKRHKEKINSVEYHLQTWR
LKERIRTVSVALVLCLNVGVDPPDVVKTNPCARMECWIDPLTLNPQKALD
TIGNALQQQYERWQSRARYRHSLDPTVDDVKKLCTSLRRNAKEEHVLFHY
NGHGVPRPTLNGEIWVFNKQYTQYIPLSVYDLQTWMGSPSIYVYDCSNAG
LILESFNQFKQTRENDYEKQLSQGVASPQIPPVRNCLQMAACGTNELLPM
VPDLPADLFTACLTTPMKVALKWFISQKSYHNLVPGITNELLDKIPGQLN
DRRTPLGELNWIFTAVTDTIAWNTLPRDLFQKLFRTDSMVASLFRHFLLA
ERVMRSYNCTPVTCPKLPSMYHHPMWQAWDLAVDQCLSQLPVIIIDESKY
KNSSFFAEHLTAFQVWLAMGSSRRDPPEQLPIVLQVLLSQVHRLRALDLL
GRFLDLGPWAVGLALNVGIFHYVLKLLQSTAREIRPLMVFIWAKILAVDS
SCQMDLVKANNHKYFLSVLSDPYMPPEHKTTGSFVIAKIIHDYPAGQEAC
LKGSMISICLEHLDETHPLLRQWLALCLGLIWTQCDAARWCAIRDSAQDK
IAKLLTDNLPEVRAAAVFALGRLISNTGNRSDHANMVDHSVATMLASTVG
NDGSPLVRKELVVAFYGLIVQFEQAFSVVAVQFLEEDRRRDVLGSSPHEP
ETKKGWILVAQGSDAAFMTSTDSSTLKKHQSSRDVPRIPSSSHSRQNSQS
SSLDSESGVFLRPPRTTSTSSGSSTLHETVYTRVWKVMLNLSVDPYPDVA
EMAKKVVNNVTVKATIGASQPRSKSNQGFHSMPSSPNTSEFLHPDAHLHL
DKSFRRSSSAQVNSTKSTPSAPSTPQPSTTNVRSGPNTPDAVRMKRLSTS
SVPNINPHSILFPTKRRNFDKGPDTAPVAEGDSSESDEEEPLTTKPVLVQ
TKFYEWCCGYFAQSVMKPNVELDPNSPQFIEREWRFLRNSKVRTQSAKQM
REAPPARLDDELFINKNIQPPCVIKFHPYEPHLAVADKTGVSIWNYEAGS
KLNHFVNGNPKTSRITSLNILNEHDLSLLLTGSDDGAVRIWRNYCDDENG
RLKLVTAWTALSGMIPSQRGAGSGLVTTWVPQSGSLLASGDVRLVRVWDA
HRELKVMDIPTGADSCVTSMSCDPMNQNILVAGLGDGSVRLYDRRLPADD
CRVMTLREHSTWVVNVLFNRNNDNDLTTNNIISASVEGDIKFWDQRLTSS
VKTIASEKTVVGLTCFDVHQQADLIACGSANQSIKVLNMEGETLSNIRYH
DGFIGQRIGPLSCLAFHPYWTYLAAGSTDSFLSMYSCQKPMALRLDELGI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041288	XLOC_041288	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065890	TCONS_00065890	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR029347	Raptor_N
IPR011989	ARM-like
IPR015943	WD40/YVTN_repeat-like_dom
IPR000357	HEAT
IPR017986	WD40_repeat_dom
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01547	YEAST176DUF	coord: 436..457 score: 83.12 coord: 254..274 score: 65.31 coord: 97..116 score: 55.71 coord: 118..139 score: 63.64 coord: 144..169 score: 82.97 coord: 171..195 score: 64.57 coord: 405..435 score: 64.52 coord: 330..354 score: 72.57 coord: 53..74 score: 68.83 coord: 295..322 score: 84.18 coord: 1177..1195 score: 53.38 coord: 483..499 score: 64.71 coord: 459..478 score: 77.86
None	No IPR available	GENE3D	3.40.50.1460		coord: 82..300 e-value: 4.0E-6 score: 25.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 719..775
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 817..943
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 1141..1193 e-value: 0.028 score: 23.6 coord: 1253..1288 e-value: 15.0 score: 9.7 coord: 1199..1244 e-value: 0.0053 score: 26.0 coord: 1290..1336 e-value: 0.55 score: 18.7 coord: 1005..1045 e-value: 120.0 score: 3.9 coord: 1049..1092 e-value: 0.92 score: 17.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 1056..1091 e-value: 0.0086 score: 16.8
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 1077..1091 score: 8.67
IPR029347	Raptor, N-terminal CASPase-like domain	SMART	SM01302	Raptor_N_2	coord: 54..207 e-value: 5.3E-95 score: 331.6
IPR029347	Raptor, N-terminal CASPase-like domain	PFAM	PF14538	Raptor_N	coord: 56..206 e-value: 2.3E-70 score: 235.2
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 428..815 e-value: 2.1E-24 score: 85.5
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 1234..1346 e-value: 4.5E-13 score: 48.3
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 982..1112 e-value: 2.2E-8 score: 33.0
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 1121..1233 e-value: 2.0E-14 score: 52.8
IPR000357	HEAT repeat	PFAM	PF02985	HEAT	coord: 601..626 e-value: 0.0015 score: 18.5
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 1041..1345 score: 13.316
IPR017986	WD40-repeat-containing domain	SUPERFAMILY	50978	WD40 repeat-like	coord: 999..1335
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 398..670 coord: 771..814

Blast

[Close]

BLAST of TCONS_00065890-protein vs. Swiss-Prot (Human)
Match: RPTOR (Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1)

HSP 1 Score: 1483.39 bits (3839), Expect = 0.000e+0
Identity = 755/1369 (55.15%), Postives = 962/1369 (70.27%), Query Frame = 0

Query:   14 GTEDEDELLDWQLQLCFMKKRHKEKINSVEYHLQTWRLKERIRTVSVALVLCLNVGVDPPDVVKTNPCARMECWIDPLTLNPQKALDTIGNALQQQYERWQSRARYRHSLDPTVDDVKKLCTSLRRNAKEEHVLFHYNGHGVPRPTLNGEIWVFNKQYTQYIPLSVYDLQTWMGSPSIYVYDCSNAGLILESFNQFKQTRENDYEKQL---SQGVASPQIPP-VRNCLQMAACGTNELLPMVPDLPADLFTACLTTPMKVALKWFISQKSYHNLVPGITNELLDKIPGQLNDRRTPLGELNWIFTAVTDTIAWNTLPRDLFQKLFRTDSMVASLFRHFLLAERVMRSYNCTPVTCPKLPSMYHHPMWQAWDLAVDQCLSQLPVIIIDESKYKNSSFFAEHLTAFQVWLAMGSSRRDPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVGLALNVGIFHYVLKLLQSTAREIRPLMVFIWAKILAVDSSCQMDLVKANNHKYFLSVLSDPYMPPEHKTTGSFVIAKIIHDYPAGQEACLKGSMISICLEHLDETHPLLRQWLALCLGLIWTQCDAARWCAIRDSAQDKIAKLLTDNLPEVRAAAVFALGRLISNTGNRSDHANMVDHSVATMLASTVGNDGSPLVRKELVVAFYGLIVQFEQAFSVVAVQFLEEDRRRDVLGSSPHEPETKKGWILVAQGSDAAFMTSTDSSTLKKHQSSRDVPRIPSSSHSRQNSQSSSLDSESG--VFLRPP-------------------------------RTTSTSSGSSTL---HETVYTRVWKVMLNLSVDPYPDVAEMAKKVVNNVTVKATIGASQPRSKSNQGF-HSMPSSPNTSEFLHPDAHLHLDKSFRRSSSAQVNSTKSTPSAPSTP--QPSTTNVRSGPNTPDAVRMKRLSTSSVPNINPHSILFPTKRRNFDKGPDTAPVAEGDSSESDEEEPLTTKPVLVQTKFYEWCCGYFAQSVMKPNVELDPNSPQFIEREWRFLRNSKVRTQSAKQMREAPPARLDDELFINKNIQPPCVIKFHPYEPHLAVADKTGVSIWNYEAGSKLNHFVNGNPKTSRITSLNILNEHDLSLLLTGSDDGAVRIWRNYCDDENGRLKLVTAWTALSGMIPSQRGAGSGLVTTWVPQSGSLLASGDVRLVRVWDAHRELKVMDIPTGADSCVTSMSCDPMNQNILVAGLGDGSVRLYDRRLPADDCRVMTLREHSTWVVNVLFNRNNDNDLTTNNIISASVEGDIKFWDQRLTSSVKTIASEKTVVGLTCFDVHQQADLIACGSANQSIKVLNMEGETLSNIRYHDGFIGQRIGPLSCLAFHPYWTYLAAGSTDSFLSMYSCQK 1339
            G EDE +L DW L L FMKKRH EKI   +   Q+WR+K+R++TVSVALVLCLNVGVDPPDVVKT PCAR+ECWIDPL++ PQKAL+TIG  LQ+QYE WQ RARY+ SLDPTVD+VKKLCTSLRRNAKEE VLFHYNGHGVPRPT+NGE+WVFNK YTQYIPLS+YDLQTWMGSPSI+VYDCSNAGLI++SF QF   RE + E      +  +A   +PP ++NC+Q+AAC   ELLPM+PDLPADLFT+CLTTP+K+AL+WF  QK   +LVPG+T +L++KIPG+LNDRRTPLGELNWIFTA+TDTIAWN LPRDLFQKLFR D +VASLFR+FLLAER+MRSYNCTPV+ P+LP  Y H MWQAWDLAVD CLSQLP II + + +++S FFAE LTAFQVWL MG   R+PPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAV LAL+VGIF YVLKLLQS+ARE+RPL+VFIWAKILAVDSSCQ DLVK N HKYFLSVL+DPYMP EH+T  +F++A I++ Y  GQEACL+G++I+ICLE L++ HPLLRQW+A+CLG IW   D+ARWC +RDSA +K+  LL+D +PEVR AAVFALG  + N+  R+DH+  +DH+VA MLA  V +DGSP+VRKELVVA   L+VQ+E  F  VA+QF+EE++   +       P T +G      GS      S  +  L+   S  ++  + ++    ++ Q+ SL  ESG  V   P                                R +S SS +S +     +VYT++W+V+L+L+ DPYP+V+++A KV+N++  KAT+ A   R         S P+SP T++ +H         +   SSS+  N     P +   P  +P TT    GP              +     PHS  FP  R+ FDKGP+       D++        T     VQT F +W   YFAQ VMK   E D  S    EREWRFLRNS+VR Q A+Q+ +    RLDD++F+N+N   P V+KFHP+ P +AVADK  +  W++E G KL++F NGNP+ +R+T++  LN  D SLLLT +DDGA+R+W+N+ D E    ++VTAW  LS M+P+ RGA  G+V  W  ++G L++SGDVR+VR+WD  RE+KV DIPTGADSCVTS+SCD  +++++VAGLGDGS+R+YDRR+   +CRVMT REH+ WVV     +  D      +I+S SV GD++ +D R+  SV  +   + V GLT  D+H QADLIACGS NQ   + N  GE ++NI+Y+DGF+GQR+G +SCLAFHP+W +LA GS D ++S+YS +K
Sbjct:   14 GEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSVALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIYDLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNCIQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCV-SLVPGVTLDLIEKIPGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSYNCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWLTMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLLQSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILAVIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSAHEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLV-SDGSPMVRKELVVALSHLVVQYESNFCTVALQFIEEEKNYAL-----PSPATTEG------GSLTPVRDSPCTPRLRSVSSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILSFETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYKATVNARPQRVLDTSSLTQSAPASP-TNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRDLPSGRPGTT----GP--------------AGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISAT-----VQTGFCDWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQ-AQQVIQKGITRLDDQIFLNRNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQDCSLLLTATDDGAIRVWKNFADLEKNP-EMVTAWQGLSDMLPTTRGA--GMVVDWEQETGLLMSSGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDS-HRSLIVAGLGDGSIRVYDRRMALSECRVMTYREHTAWVVKASLQKRPD-----GHIVSVSVNGDVRIFDPRMPESVNVL---QIVKGLTALDIHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGSNDYYISVYSVEK 1332

The following BLAST results are available for this feature:

BLAST of TCONS_00065890-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065890-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RPTOR	0.000e+0	55.15	Regulatory-associated protein of mTOR OS=Homo sapi...	[more]

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TCONS_00065890-protein (polypeptide) - C. hemisphaerica