TCONS_00065794-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065794-protein
Unique Name	TCONS_00065794-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	748

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065794-protein ID=TCONS_00065794-protein|Name=TCONS_00065794-protein|organism=Clytia hemisphaerica|type=polypeptide|length=748bp
MISIKDQILNIRQKEQQDTEPDREPLLNTENYNKMVKMNSQTACSTDVGS
MEDLMQTSLKEGLSSKEVTHRQKLYGGNDFDVGEETPIWKKYLMMFKEPM
IILLLVSGFVSICMGQYDDAVSITVAVIIVVTVAFIQEYRSDQSVAAITK
LVPPTCFCLRDGEWVDFLAENLVPGDIISIETGDRVPADVRLFEAIHLQI
DESSFTGEIKPAKKQTGVLSASASLSERNNIALMGTLVCSGKGKGIVFGT
GVDSEFGSVFQMMKEEEPPKTPLQKSMDQLGAQLSTYSILIIGFVVFLGW
VQKRRIVEMFTIGVSLAVAAIPEGLPIVVTVTLALGVMRMARKNAIVKRL
PVVETLGCATVICSDKTGTLTKNEMTVTDLVLPDNRKAMVTGIGYSGHGE
VMIDGVAASEFTDLSLTQLVKTGCLCNNASIRNGSLHGQATEGAIIAVGL
KVGLIRLGDEYTRVDEIPFSSETKWMAVKTKKTWAYNNEAEEVYHVKGAV
ERVLDKCRTSYHDGSSVIMTNNKRKEIFDAAHQLASRGLRVIAFAYGKDL
SNLTYLGLAGIIDPPRRGVPESIQVLQDSGVQVKMITGDAKDTAVAVAQA
IGLKVTEQRNVISGEQLESMDCYELRRVIEQISIFYRVSPKNKVTIVKAL
QELGHVVGMTGDGVNDAVALKCADIGIAMGKCGTDVAKEAADMILADDDF
GTIMSALAEGKGIYYNIRNFVRFQLSTSIAAISLIMISTLMKLPNPLK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041225	XLOC_041225	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065794	TCONS_00065794	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001757	P_typ_ATPase
IPR004014	ATPase_P-typ_cation-transptr_N
IPR006413	P-type_ATPase_IIA_PMR1
IPR023214	HAD-like_dom
IPR023299	ATPase_P-typ_cyto_domN
IPR018303	ATPase_P-typ_P_site
IPR008250	ATPase_P-typ_transduc_dom_A
IPR023298	ATPase_P-typ_TM_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006816	calcium ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005388	calcium-transporting ATPase activity
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005388	calcium-transporting ATPase activity
molecular_function	GO:0000166	nucleotide binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00119	CATATPASE	coord: 579..589 score: 59.74 coord: 201..215 score: 46.27 coord: 684..696 score: 62.21 coord: 363..377 score: 77.33 coord: 557..568 score: 49.65 coord: 660..679 score: 77.79
None	No IPR available	GENE3D	2.70.150.10		coord: 51..264 e-value: 2.6E-40 score: 137.3
None	No IPR available	PFAM	PF00122	E1-E2_ATPase	coord: 150..343 e-value: 7.3E-51 score: 172.2
None	No IPR available	PFAM	PF00702	Hydrolase	coord: 361..674 e-value: 3.0E-17 score: 63.5
None	No IPR available	CDD	cd01427	HAD_like	coord: 568..679 e-value: 2.30515E-4 score: 39.6607
IPR001757	P-type ATPase	PRINTS	PR00120	HATPASE	coord: 527..545 score: 33.42 coord: 660..676 score: 83.68 coord: 692..717 score: 21.54 coord: 632..648 score: 36.62
IPR001757	P-type ATPase	TIGRFAM	TIGR01494	TIGR01494	coord: 628..743 e-value: 2.2E-30 score: 103.4 coord: 260..384 e-value: 5.4E-27 score: 92.3
IPR004014	Cation-transporting P-type ATPase, N-terminal	SMART	SM00831	Cation_ATPase_N_a_2	coord: 47..116 e-value: 7.3E-8 score: 42.1
IPR004014	Cation-transporting P-type ATPase, N-terminal	PFAM	PF00690	Cation_ATPase_N	coord: 55..111 e-value: 1.5E-14 score: 53.3
IPR006413	P-type ATPase, subfamily IIA, PMR1-type	TIGRFAM	TIGR01522	TIGR01522	coord: 41..747 e-value: 1.6E-271 score: 900.9
IPR023214	HAD-like domain	GENE3D	3.40.50.1000		coord: 559..705 e-value: 2.2E-47 score: 160.5
IPR023214	HAD-like domain	SUPERFAMILY	56784	HAD-like	coord: 361..381 coord: 524..737
IPR023299	P-type ATPase, cytoplasmic domain N	GENE3D	3.40.1110.10		coord: 326..558 e-value: 1.2E-38 score: 132.0
IPR023299	P-type ATPase, cytoplasmic domain N	SUPERFAMILY	81660	Metal cation-transporting ATPase, ATP-binding domain N	coord: 370..561
IPR018303	P-type ATPase, phosphorylation site	PROSITE	PS00154	ATPASE_E1_E2	coord: 365..371
IPR008250	P-type ATPase, A domain	SUPERFAMILY	81653	Calcium ATPase, transduction domain A	coord: 153..263
IPR023298	P-type ATPase, transmembrane domain	SUPERFAMILY	81665	Calcium ATPase, transmembrane domain M	coord: 264..357 coord: 46..154 coord: 710..747

Blast

[Close]

BLAST of TCONS_00065794-protein vs. Swiss-Prot (Human)
Match: AT2C1 (Calcium-transporting ATPase type 2C member 1 OS=Homo sapiens GN=ATP2C1 PE=1 SV=3)

HSP 1 Score: 816.609 bits (2108), Expect = 0.000e+0
Identity = 402/722 (55.68%), Postives = 528/722 (73.13%), Query Frame = 0

Query:   28 NTENYNKMVKMNSQTACSTDVGSMEDLMQTSLKEGLSSKEVTHRQKLYGGNDFDVGEETPIWKKYLMMFKEPMIILLLVSGFVSICMGQYDDAVSITVAVIIVVTVAFIQEYRSDQSVAAITKLVPPTCFCLRDGEWVDFLAENLVPGDIISIETGDRVPADVRLFEAIHLQIDESSFTGEIKPAKKQTGVLSASAS--LSERNNIALMGTLVCSGKGKGIVFGTGVDSEFGSVFQMMKEEEPPKTPLQKSMDQLGAQLSTYSILIIGFVVFLGWVQKRRIVEMFTIGVSLAVAAIPEGLPIVVTVTLALGVMRMARKNAIVKRLPVVETLGCATVICSDKTGTLTKNEMTVTDLVLPDNRKAMVTGIGYSGHGEVMIDGVAASEFTDLSLTQLVKTGCLCNNASIRNGSLHGQATEGAIIAVGLKVGLIRLGDEYTRVDEIPFSSETKWMAVKTKKTWAYNNEAEEVYHVKGAVERVLDKCRTSYHDGSSVIMTNNKRKEIFDAAHQLASRGLRVIAFAYGKDLSNLTYLGLAGIIDPPRRGVPESIQVLQDSGVQVKMITGDAKDTAVAVAQAIGLKVTEQRNVISGEQLESMDCYELRRVIEQISIFYRVSPKNKVTIVKALQELGHVVGMTGDGVNDAVALKCADIGIAMGKCGTDVAKEAADMILADDDFGTIMSALAEGKGIYYNIRNFVRFQLSTSIAAISLIMISTLMKLPNPL 747
            N EN   +  + S+ A    V  +  ++Q  L+ GL+  EV+HR+  +G N+FD+ E+ P+WKKY+  FK P+I+LLL S  +S+ M Q+DDAVSITVA++IVVTVAF+QEYRS++S+  ++KLVPP C C+R+G+    LA +LVPGD + +  GDRVPAD+RLFEA+ L IDESS TGE  P  K T    A+ +  L+ R+NIA MGTLV  GK KG+V GTG +SEFG VF+MM+ EE PKTPLQKSMD LG QLS YS  IIG ++ +GW+  + I+EMFTI VSLAVAAIPEGLPIVVTVTLALGVMRM +K AIVK+LP+VETLGC  VICSDKTGTLTKNEMTVT +   D   A VTG+GY+  GEV++DG     F + +++++V+ GC+CN+A IRN +L G+ TEGA+IA+ +K+GL  L  +Y R  E PFSSE KWMAVK         +  E+  +KGA E+V+  C T    G ++ +T  +R        ++ S GLRV+A A G +L  LT+LGL GIIDPPR GV E++  L  SGV +KMITGD+++TAVA+A  +GL  ++    +SGE++++MD  +L +++ ++++FYR SP++K+ I+K+LQ+ G VV MTGDGVNDAVALK ADIG+AMG+ GTDV KEAADMIL DDDF TIMSA+ EGKGIY NI+NFVRFQLSTSIAA++LI ++TLM  PNPL
Sbjct:   11 NGENETMIPVLTSKKASELPVSEVASILQADLQNGLNKCEVSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAVISVLMHQFDDAVSITVAILIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRLFEAVDLSIDESSLTGETTPCSKVTAPQPAATNGDLASRSNIAFMGTLVRCGKAKGVVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFYSFGIIGIIMLVGWLLGKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHIFTSDGLHAEVTGVGYNQFGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNNTLMGKPTEGALIALAMKMGLDGLQQDYIRKAEYPFSSEQKWMAVKC--VHRTQQDRPEICFMKGAYEQVIKYCTTYQSKGQTLTLTQQQRDVYQQEKARMGSAGLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAVAIASRLGL-YSKTSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSLQKNGSVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPL 729

The following BLAST results are available for this feature:

BLAST of TCONS_00065794-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065794-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AT2C1	0.000e+0	55.68	Calcium-transporting ATPase type 2C member 1 OS=Ho...	[more]

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TCONS_00065794-protein (polypeptide) - C. hemisphaerica