TCONS_00065557-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065557-protein
Unique NameTCONS_00065557-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length338

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065557-protein ID=TCONS_00065557-protein|Name=TCONS_00065557-protein|organism=Clytia hemisphaerica|type=polypeptide|length=338bp
MSIPNSPGGKPSAANIAAANIAMGIPSMQDVCLLPEITTPTVNDNRPFQC
TICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTG
EKPYQCHLCAKAFPQAGQLYSHKKTHGINPRVTKDPPEGDDVPRRGRKRK
NKNPSQVVLAPPPVAYLIESLHRPGLPPQYDHLSSVVPTKERKIRENSKH
QLQVTDPLPPPEKPQRLEDLTQALLRDDPLSTVQNRQRLIPVTRDQYQHF
LQNQQLFYHHPEQYQQHYYQRPESSRETFTTITTSLPPATTLTQSVKNFK
ASEAPGKQPETQTANVKVEEIPSHLKDLERLIPSYEQT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041086XLOC_041086Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065557TCONS_00065557Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 48..70
e-value: 0.0043
score: 26.3
coord: 104..126
e-value: 0.0039
score: 26.4
coord: 76..98
e-value: 0.0021
score: 27.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 50..70
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 106..126
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 78..98
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 104..126
score: 11.385
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 48..75
score: 15.376
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 76..103
score: 17.558
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 44..79
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 70..122
NoneNo IPR availableGENE3D3.30.60.20coord: 28..52
e-value: 0.35
score: 10.3
NoneNo IPR availableGENE3D3.30.160.60coord: 70..89
e-value: 4.0E-21
score: 74.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 48..70
e-value: 3.2E-4
score: 20.9
coord: 104..126
e-value: 9.4E-4
score: 19.4
coord: 76..98
e-value: 3.9E-4
score: 20.6
NoneNo IPR availableGENE3D3.30.160.60coord: 90..116
e-value: 2.8E-19
score: 68.7
NoneNo IPR availableGENE3D3.30.160.60coord: 117..192
e-value: 4.4E-6
score: 26.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..213
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 53..69
e-value: 2.6E-12
score: 46.0

Blast
BLAST of TCONS_00065557-protein vs. Swiss-Prot (Human)
Match: ZN135 (Zinc finger protein 135 OS=Homo sapiens GN=ZNF135 PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 6.195e-26
Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 0
Query:   41 TVNDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            T    +P++C+ CG  FRQ  HLTQH+RIHT ++PY C  C KAF   S L +H+RIHTGEKPY+CH C KAF Q   L  H++TH
Sbjct:  319 THTGEKPYECSECGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTH 404          

HSP 2 Score: 100.908 bits (250), Expect = 2.004e-23
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 0
Query:   41 TVNDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            T    +P++C+ CG  FRQ  HLTQH RIHT ++PY C+ C KAF   S L +H+RIHTGEKPY+C+ C +AF Q   L  H++ H
Sbjct:  459 THTGEKPYECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQLAPLIQHQRIH 544          

HSP 3 Score: 93.2041 bits (230), Expect = 7.245e-21
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 0
Query:   43 NDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
               +P+ C  CG  F     L+QH R HT ++PY CS C KAF+Q + L QH+RIHTGEKPY+C+ C KAF  +  L  H++ H
Sbjct:  433 TGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPYECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIH 516          

HSP 4 Score: 92.8189 bits (229), Expect = 1.012e-20
Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   41 TVNDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            T    +P++C  CG  F Q   LT+H RIHT ++PY C+ C K F   S L+QHER HTGEKPY+C  C KAF Q+  L  H++ H
Sbjct:  403 THTGEKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPYECSQCGKAFRQSTHLTQHQRIH 488          

HSP 5 Score: 91.6633 bits (226), Expect = 2.207e-20
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 0
Query:   43 NDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTHGINPRVTKDPPEG 139
               +P++C  CG  F     LT+H RIHT ++PY C+ C +AF Q + L QH+RIHTGEKPY+C+ C +AF Q+  L  H++ H      TK+ P G
Sbjct:  489 TGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIH------TKEKPYG 579          

HSP 6 Score: 86.6557 bits (213), Expect = 1.215e-18
Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 0
Query:   41 TVNDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            T    +P++C+ CG  F  +   +QH R HT ++PY CS C KAF+Q   L QH RIHTGEKPYQC  C KAF  +  L  H++ H
Sbjct:  291 THTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIH 376          

HSP 7 Score: 86.6557 bits (213), Expect = 1.284e-18
Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 0
Query:   43 NDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
               +P++C  CG  F Q   L QH R HT ++PY C  C KAF Q + L +H RIHTGEKPY C+ C K F  +  L  H++TH
Sbjct:  377 TGEKPYECHECGKAFTQITPLIQHQRTHTGEKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTH 460          

HSP 8 Score: 85.5001 bits (210), Expect = 3.142e-18
Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   43 NDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH-GINPRVTKD 135
               +P++C  CG  F Q   L +H RIHT ++PY C+ C K+F   S L+QHER HTGEKPY+CH C K+F Q+  L  H++ H G  P   +D
Sbjct:  545 TGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRD 638          

HSP 9 Score: 84.7297 bits (208), Expect = 4.983e-18
Identity = 38/86 (44.19%), Postives = 50/86 (58.14%), Query Frame = 0
Query:   41 TVNDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            T    +P++C  CG  F     L +H R HT +RPY C  C K F+  S L +H+RIHTGEKPY+C  C + F Q   L  H++TH
Sbjct:  207 TCVKEKPYKCQECGKAFSHSSALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLIQHQRTH 292          

HSP 10 Score: 82.4185 bits (202), Expect = 2.663e-17
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 0
Query:   46 RPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            +P+ C  CG  F     L+QH R HT ++PY C  C K+F+Q + L QH RIHTGEKPY C  C KAF  +  L  H++TH
Sbjct:  576 KPYGCNECGKSFSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHSSSLTKHQRTH 656          

HSP 11 Score: 80.8777 bits (198), Expect = 1.076e-16
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 0
Query:   43 NDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
               +P++CT CG  F Q   L QH R HT ++PY CS C K+F  +S  +QHER HTGEKPY+C  C KAF Q+  L  H + H
Sbjct:  265 TGEKPYKCTQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLRIH 348          
The following BLAST results are available for this feature:
BLAST of TCONS_00065557-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN1356.195e-2654.65Zinc finger protein 135 OS=Homo sapiens GN=ZNF135 ... [more]
back to top