TCONS_00065557-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065557-protein
Unique Name	TCONS_00065557-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	338

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065557-protein ID=TCONS_00065557-protein|Name=TCONS_00065557-protein|organism=Clytia hemisphaerica|type=polypeptide|length=338bp
MSIPNSPGGKPSAANIAAANIAMGIPSMQDVCLLPEITTPTVNDNRPFQC
TICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTG
EKPYQCHLCAKAFPQAGQLYSHKKTHGINPRVTKDPPEGDDVPRRGRKRK
NKNPSQVVLAPPPVAYLIESLHRPGLPPQYDHLSSVVPTKERKIRENSKH
QLQVTDPLPPPEKPQRLEDLTQALLRDDPLSTVQNRQRLIPVTRDQYQHF
LQNQQLFYHHPEQYQQHYYQRPESSRETFTTITTSLPPATTLTQSVKNFK
ASEAPGKQPETQTANVKVEEIPSHLKDLERLIPSYEQT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041086	XLOC_041086	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065557	TCONS_00065557	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013087	Znf_C2H2_type
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 48..70 e-value: 0.0043 score: 26.3 coord: 104..126 e-value: 0.0039 score: 26.4 coord: 76..98 e-value: 0.0021 score: 27.3
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 50..70
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 106..126
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 78..98
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 104..126 score: 11.385
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 48..75 score: 15.376
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 76..103 score: 17.558
IPR013087	Zinc finger C2H2-type	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 44..79
IPR013087	Zinc finger C2H2-type	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 70..122
None	No IPR available	GENE3D	3.30.60.20		coord: 28..52 e-value: 0.35 score: 10.3
None	No IPR available	GENE3D	3.30.160.60		coord: 70..89 e-value: 4.0E-21 score: 74.3
None	No IPR available	PFAM	PF00096	zf-C2H2	coord: 48..70 e-value: 3.2E-4 score: 20.9 coord: 104..126 e-value: 9.4E-4 score: 19.4 coord: 76..98 e-value: 3.9E-4 score: 20.6
None	No IPR available	GENE3D	3.30.160.60		coord: 90..116 e-value: 2.8E-19 score: 68.7
None	No IPR available	GENE3D	3.30.160.60		coord: 117..192 e-value: 4.4E-6 score: 26.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..213
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 53..69 e-value: 2.6E-12 score: 46.0

Blast

[Close]

BLAST of TCONS_00065557-protein vs. Swiss-Prot (Human)
Match: ZN135 (Zinc finger protein 135 OS=Homo sapiens GN=ZNF135 PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 6.195e-26
Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 0

Query:   41 TVNDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            T    +P++C+ CG  FRQ  HLTQH+RIHT ++PY C  C KAF   S L +H+RIHTGEKPY+CH C KAF Q   L  H++TH
Sbjct:  319 THTGEKPYECSECGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTH 404

HSP 2 Score: 100.908 bits (250), Expect = 2.004e-23
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 0

Query:   41 TVNDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            T    +P++C+ CG  FRQ  HLTQH RIHT ++PY C+ C KAF   S L +H+RIHTGEKPY+C+ C +AF Q   L  H++ H
Sbjct:  459 THTGEKPYECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQLAPLIQHQRIH 544

HSP 3 Score: 93.2041 bits (230), Expect = 7.245e-21
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 0

Query:   43 NDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
               +P+ C  CG  F     L+QH R HT ++PY CS C KAF+Q + L QH+RIHTGEKPY+C+ C KAF  +  L  H++ H
Sbjct:  433 TGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPYECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIH 516

HSP 4 Score: 92.8189 bits (229), Expect = 1.012e-20
Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = 0

Query:   41 TVNDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            T    +P++C  CG  F Q   LT+H RIHT ++PY C+ C K F   S L+QHER HTGEKPY+C  C KAF Q+  L  H++ H
Sbjct:  403 THTGEKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPYECSQCGKAFRQSTHLTQHQRIH 488

HSP 5 Score: 91.6633 bits (226), Expect = 2.207e-20
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 0

Query:   43 NDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTHGINPRVTKDPPEG 139
               +P++C  CG  F     LT+H RIHT ++PY C+ C +AF Q + L QH+RIHTGEKPY+C+ C +AF Q+  L  H++ H      TK+ P G
Sbjct:  489 TGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIH------TKEKPYG 579

HSP 6 Score: 86.6557 bits (213), Expect = 1.215e-18
Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 0

Query:   41 TVNDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            T    +P++C+ CG  F  +   +QH R HT ++PY CS C KAF+Q   L QH RIHTGEKPYQC  C KAF  +  L  H++ H
Sbjct:  291 THTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIH 376

HSP 7 Score: 86.6557 bits (213), Expect = 1.284e-18
Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 0

Query:   43 NDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
               +P++C  CG  F Q   L QH R HT ++PY C  C KAF Q + L +H RIHTGEKPY C+ C K F  +  L  H++TH
Sbjct:  377 TGEKPYECHECGKAFTQITPLIQHQRTHTGEKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTH 460

HSP 8 Score: 85.5001 bits (210), Expect = 3.142e-18
Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 0

Query:   43 NDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH-GINPRVTKD 135
               +P++C  CG  F Q   L +H RIHT ++PY C+ C K+F   S L+QHER HTGEKPY+CH C K+F Q+  L  H++ H G  P   +D
Sbjct:  545 TGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRD 638

HSP 9 Score: 84.7297 bits (208), Expect = 4.983e-18
Identity = 38/86 (44.19%), Postives = 50/86 (58.14%), Query Frame = 0

Query:   41 TVNDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            T    +P++C  CG  F     L +H R HT +RPY C  C K F+  S L +H+RIHTGEKPY+C  C + F Q   L  H++TH
Sbjct:  207 TCVKEKPYKCQECGKAFSHSSALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLIQHQRTH 292

HSP 10 Score: 82.4185 bits (202), Expect = 2.663e-17
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 0

Query:   46 RPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
            +P+ C  CG  F     L+QH R HT ++PY C  C K+F+Q + L QH RIHTGEKPY C  C KAF  +  L  H++TH
Sbjct:  576 KPYGCNECGKSFSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHSSSLTKHQRTH 656

HSP 11 Score: 80.8777 bits (198), Expect = 1.076e-16
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 0

Query:   43 NDNRPFQCTICGNRFRQQCHLTQHIRIHTNDRPYHCSHCEKAFKQKSQLNQHERIHTGEKPYQCHLCAKAFPQAGQLYSHKKTH 126
               +P++CT CG  F Q   L QH R HT ++PY CS C K+F  +S  +QHER HTGEKPY+C  C KAF Q+  L  H + H
Sbjct:  265 TGEKPYKCTQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLRIH 348

The following BLAST results are available for this feature:

BLAST of TCONS_00065557-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065557-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZN135	6.195e-26	54.65	Zinc finger protein 135 OS=Homo sapiens GN=ZNF135 ...	[more]

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TCONS_00065557-protein (polypeptide) - C. hemisphaerica