TCONS_00065260-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065260-protein
Unique NameTCONS_00065260-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length863

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065260-protein ID=TCONS_00065260-protein|Name=TCONS_00065260-protein|organism=Clytia hemisphaerica|type=polypeptide|length=863bp
MAFFEGSEYGKGDFVLLDQITMDEFMSNLKLRFEKDKIYTYIGEVVVSVN
PYKTMDIYGKEVISEYKGREIFERPPHIFALADAAYKTMKRKNQDSCIVI
SGESGAGKTEASKIIMKYIAAVTNPNKLSEVESVKDILIQSNVILEAFGN
AKTNRNDNSSRFGKYMDIDFDFKGDPIGGHINNYLLEKARVVHQQIGERN
FHSFYMLVKGASQDELSKYHLQPRPNDYFYLRQGRCNDVDSLDDKKGFSA
VNNALKASKFSAEEIEIIWKLVSSIILLGNLTFNQEGDQAIITDSEALSN
ISDCLGVSKKDCDKALCYRVVAARGEVIEKGHNKDDAIYGKNAFAKAIYD
RLFTWIVNKINSAIDPKHSSQRHVGNKVIGVLDIYGFEIFDENSFEQLCI
NYCNEKLQQLFIELVLKQEQEEYRRENIEWTQIDYFNNKIICDLIDQQHK
GIIAILDEACLNVGKVTDKMFLHAMDQKLGTHNHYKSRQTEPSNKDLTHN
QDFQIQHYAGDVKYSAMNFLDKNKDNLFQDFKRLLYNSSHQMLKDQWPEG
GQDITKVTKRPQTTATIFKNSMISLVDNLMKKIPYYVRCIKPNALKSPSK
FDEDLIAHQVRYLGLIENVRVRRAGFAFRQIYSRFLQRYKITCPATWPVY
DKDLKDGCNLIIREFHFEGDVKFGNTKIFIKSPKTIFSLEEERTKKLPMI
VLKMQKTWRGYRSRLFVRRLRAALLVMRNWRRFRVRRYVRELVASHGDAK
NQPRFGKNLPWPKIGVWPRALVDLDPILRSLFGRWRGNMMLRSVPRDQWG
EVRVKSAAIEGLQKQKPQYGLNRRWYGDYLEMVSLKLDVRYKNVHGIRKQ
GCRQDYKRFHSRN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040919XLOC_040919Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065260TCONS_00065260Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001609Myosin_head_motor_dom
IPR000048IQ_motif_EF-hand-BS
IPR027417P-loop_NTPase
Vocabulary: Cellular Component
TermDefinition
GO:0016459myosin complex
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003774motor activity
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016459 myosin complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0003774 motor activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001609Myosin head, motor domainPRINTSPR00193MYOSINHEAVYcoord: 431..459
score: 26.58
coord: 143..170
score: 73.58
coord: 378..406
score: 78.04
coord: 39..58
score: 53.65
coord: 95..120
score: 57.23
IPR001609Myosin head, motor domainSMARTSM00242MYSc_2acoord: 5..695
e-value: 0.0
score: 1188.5
IPR001609Myosin head, motor domainPFAMPF00063Myosin_headcoord: 13..681
e-value: 3.1E-241
score: 802.2
IPR001609Myosin head, motor domainPROSITEPS51456MYOSIN_MOTORcoord: 9..694
score: 243.346
NoneNo IPR availableGENE3D3.40.50.300coord: 85..469
e-value: 3.1E-4
score: 20.0
NoneNo IPR availableGENE3D4.10.270.10coord: 693..746
e-value: 1.5E-5
score: 24.2
NoneNo IPR availableCDDcd01378MYSc_Myo1coord: 23..681
e-value: 0.0
score: 1009.0
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 697..724
score: 7.126
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..742

Blast
[Close]
BLAST of TCONS_00065260-protein vs. Swiss-Prot (Human)
Match: MYO1D (Unconventional myosin-Id OS=Homo sapiens GN=MYO1D PE=1 SV=2)

HSP 1 Score: 994.186 bits (2569), Expect = 0.000e+0
Identity = 478/832 (57.45%), Postives = 623/832 (74.88%), Query Frame = 0 
Query:    1 MAFFEGSEYGKGDFVLLDQITMDEFMSNLKLRFEKDKIYTYIGEVVVSVNPYKTMDIYGKEVISEYKGREIFERPPHIFALADAAYKTMKRKNQDSCIVISGESGAGKTEASKIIMKYIAAVTNPNKLSEVESVKDILIQSNVILEAFGNAKTNRNDNSSRFGKYMDIDFDFKGDPIGGHINNYLLEKARVVHQQIGERNFHSFYMLVKGASQDELSKYHLQPRPNDYFYLRQGRCNDVDSLDDKKGFSAVNNALKASKFSAEEIEIIWKLVSSIILLGNLTFNQEGDQAIITDSEALSNISDCLGVSKKDCDKALCYRVVAARGEVIEKGHNKDDAIYGKNAFAKAIYDRLFTWIVNKINSAIDPK-HSSQRHVGNKVIGVLDIYGFEIFDENSFEQLCINYCNEKLQQLFIELVLKQEQEEYRRENIEWTQIDYFNNKIICDLIDQQHKGIIAILDEACLNVGKVTDKMFLHAMDQKLGTHNHYKSRQTEPSNKDLTHNQDFQIQHYAGDVKYSAMNFLDKNKDNLFQDFKRLLYNSSHQMLKDQWPEGGQDITKVTKRPQTTATIFKNSMISLVDNLMKKIPYYVRCIKPNALKSPSKFDEDLIAHQVRYLGLIENVRVRRAGFAFRQIYSRFLQRYKITCPATWPVYD-KDLKDGCNLIIREFHFEGDVKFGNTKIFIKSPKTIFSLEEERTKKLPMIVLKMQKTWRGYRSRLFVRRLRAALLVMRNWRRFRVRRYVRELVASHGDAKNQPRFGKNLPWPKIGVWPRALVDLDPILRSLFGRWRGNMMLRSVPRDQWGEVRVKSAAIEGLQKQKPQYGLNRRWYGDYL 830
            MA  E  E+GK DFVL+D ++M EFM+NL+LRFEK +IYT+IGEVVVSVNPYK ++IYG++ I +YKGRE++ERPPH+FA+ADAAYK MKR+++D+CIVISGESGAGKTEASK IM+YIAA+TNP++ +EVE VK++L++SN +LEAFGNAKTNRNDNSSRFGKYMDI+FDFKGDPIGGHINNYLLEK+RV+ QQ GER+FHSFY L++G S+  L   HLQ   + Y Y+  G      S++D   F  V +A+K   F  EEI+ ++K++++I+ LGNL F  +GD  +I + + +S I++ L       +KAL YR VA   ++I+K H + +A YG++AFAKAIY+RLF WIV +IN  I+ K + +  H  N VIGVLDIYGFEIFD NSFEQ CINYCNEKLQQLFI+LVLKQEQEEY+RE I W  IDYFNN+II DL++QQHKGIIAILD+AC+NVGKVTD+MFL A++ KLG H H+ SR+   S+K L  ++DF+I+HYAGDV YS + F+DKNKD LFQDFKRL+YNSS+ +LK+ WPEG   IT+VTKRP T AT+FKNSMI+LVDNL  K PYYVRCIKPN  KSP  FD++   HQV YLGL+ENVRVRRAGFAFRQ Y +FL RYK+    TWP +D    K+    +I    F+ DV +G TKIFI++P+T+F+LEE R + L  IVL +QK WRG  +R+  +R +AAL ++R +RR++V+ Y+ E+       K    +GK++ WP     P+ L   +  L+++F RWR + +++S+P     +VR K AA+E L+ Q+   GL R W G+YL
Sbjct:    1 MAEQESLEFGKADFVLMDTVSMPEFMANLRLRFEKGRIYTFIGEVVVSVNPYKLLNIYGRDTIEQYKGRELYERPPHLFAIADAAYKAMKRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPSQRAEVERVKNMLLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRVIVQQPGERSFHSFYQLLQGGSEQMLRSLHLQKSLSSYNYIHVG-AQLKSSINDAAEFRVVADAMKVIGFKPEEIQTVYKILAAILHLGNLKFVVDGDTPLIENGKVVSIIAELLSTKTDMVEKALLYRTVATGRDIIDKQHTEQEASYGRDAFAKAIYERLFCWIVTRINDIIEVKNYDTTIHGKNTVIGVLDIYGFEIFDNNSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQIIVDLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKHAHFSSRKLCASDKILEFDRDFRIRHYAGDVVYSVIGFIDKNKDTLFQDFKRLMYNSSNPVLKNMWPEGKLSITEVTKRPLTAATLFKNSMIALVDNLASKEPYYVRCIKPNDKKSPQIFDDERCRHQVEYLGLLENVRVRRAGFAFRQTYEKFLHRYKMISEFTWPNHDLPSDKEAVKKLIERCGFQDDVAYGKTKIFIRTPRTLFTLEELRAQMLIRIVLFLQKVWRGTLARMRYKRTKAALTIIRYYRRYKVKSYIHEVARRFHGVKTMRDYGKHVKWPSP---PKVLRRFEEALQTIFNRWRASQLIKSIPASDLPQVRAKVAAVEMLKGQRADLGLQRAWEGNYL 828
The following BLAST results are available for this feature:
BLAST of TCONS_00065260-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYO1D0.000e+057.45Unconventional myosin-Id OS=Homo sapiens GN=MYO1D ... [more]
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