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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00065044-protein ID=TCONS_00065044-protein|Name=TCONS_00065044-protein|organism=Clytia hemisphaerica|type=polypeptide|length=530bp
MDQHSPPSSKPRMITNNMPATTISRPAPTTRMNAPRQHPGTKEGRNYMDI
DEFFKKVGGDTSPKSKNYLTKFSNMVPPLLNASDTSSAARSQGQVLQNAS
QEEKLKLLSALYRKNDYLESRRRHASPHERRMYYEHDEVSRSEESLKRRY
DEHERSLTQIYRRNPNDSRYIVMPPLTKISKGRDDSDLILQRKIERKLKD
SKKDSRQDTVEPYIDVLGDQHESEIGDKQSTLYQRTNSLDRLVKLEEKVA
STNHRPPKIDHRPKSADILRKDTESRSQSKSRERTDEEECIPKENEPSDQ
KDAIVDSLLMERLWKNEQQKLSSGVTTNEKPVKSPVSDITGGTANSSFDE
SSRHYDSSHDSDSSGKSEVYDESYQMKTQAAHGLISLNSGGVATNTNGAN
ASDDSGGAAKVKKRGGGKPGRRRKRGYIYDPKPLVPKSKINNLPAELKDE
EYWTRRQRNNEAAKRSRENRRVKELEMMTLVKDLTGTNTELRTRIQELEV
RNKFLEQILGRHPAGLDGSGGSNASSSDLS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004827 | bZIP |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 481..508 |
| None | No IPR available | GENE3D | 1.20.5.170 | | coord: 437..514
e-value: 2.3E-10
score: 39.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..47 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 248..303 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 511..530 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 320..371 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 396..442 |
| None | No IPR available | CDD | cd14695 | bZIP_HLF | coord: 448..507
e-value: 1.02282E-13
score: 65.2661 |
| None | No IPR available | SUPERFAMILY | 57959 | Leucine zipper domain | coord: 447..509 |
| IPR004827 | Basic-leucine zipper domain | SMART | SM00338 | brlzneu | coord: 447..511
e-value: 6.5E-11
score: 52.3 |
| IPR004827 | Basic-leucine zipper domain | PFAM | PF07716 | bZIP_2 | coord: 448..499
e-value: 4.7E-13
score: 48.9 |
| IPR004827 | Basic-leucine zipper domain | PROSITE | PS50217 | BZIP | coord: 449..512
score: 10.094 |
Blast
The following BLAST results are available for this feature:
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