TCONS_00064573-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064573-protein
Unique NameTCONS_00064573-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length277

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064573-protein ID=TCONS_00064573-protein|Name=TCONS_00064573-protein|organism=Clytia hemisphaerica|type=polypeptide|length=277bp
MRTKMSFKAAIFMVLFLRTSKAAISYDDCKAGDAIFKKSKTELIIHGSVE
WEESFQVTNDMQCSMACRKHTNCQSAIVNESNTCTLRDVNRRSAQVTFKP
NPSLRYFERHACPPSVEQAFIAFVSDVENCKDIYAKGHLQNGIYAIKLSS
GVYQPIRCNMVNQDEGGWTIVLRRLSGIVPFDKNWETFKSGFGSLDTEFY
IGNERFHQLTQNGTQKFFIKMVLRGGNVRNMIFDEVRIGSEAEKYSLNID
YMCVHPRMSTISNIKEIATPTSTMCVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040496XLOC_040496Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064573TCONS_00064573Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR003609Pan_app
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 125..277
e-value: 3.2E-8
score: -28.4
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 128..251
e-value: 1.4E-24
score: 87.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 121..249
score: 21.119
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 127..252
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 123..263
e-value: 4.0E-32
score: 110.6
NoneNo IPR availableGENE3D3.50.4.10coord: 20..113
e-value: 3.7E-7
score: 29.6
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 54..110
IPR003609PAN/Apple domainPROSITEPS50948PANcoord: 29..112
score: 8.004

Blast
[Close]
BLAST of TCONS_00064573-protein vs. Swiss-Prot (Human)
Match: FCN2 (Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.148e-20
Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 0 
Query:  130 CKDIYAKGHLQNGIYAIKLSSGVYQPIRCNMVNQDEGGWTIVLRRLSGIVPFDKNWETFKSGFGSLDTEFYIGNERFHQLTQNGTQKFFIKMVLRGGNVRNMIFDEVRIGSEAEKYSL 247
            CKD+  +GH  +G + I L       + C+M + D GGWT+  RR+ G V F ++W T+K GFGS   EF++GN+  H LT  GT +  + +V    N +   +   ++  EAEKY+L
Sbjct:  105 CKDLLDRGHFLSGWHTIYLPDCRPLTVLCDM-DTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNL 221
The following BLAST results are available for this feature:
BLAST of TCONS_00064573-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN23.148e-2037.29Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2[more]
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