TCONS_00064510-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064510-protein
Unique NameTCONS_00064510-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length520

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064510-protein ID=TCONS_00064510-protein|Name=TCONS_00064510-protein|organism=Clytia hemisphaerica|type=polypeptide|length=520bp
MLLRIGIHYLNIDEEKDLNNVALEEYIPTKIMGNKQGRSKDLEEELKVID
GNNANSFDDNGPISYQDAVVMMSDYLKELTINDGKSEITNKLDNTVTQAL
SKAINFPEFVDFDEEDKSLNELIQSYAWIQPDDLKIQLDLQDKNTLSGLS
DAVHSLAIMTTRDNNAFEMLKCLVNCCKHANYAIQKAGSGADDLLPTLIY
VVLKSNPPRLYSHLKFVSNFLTTNDQIFTNSHRISHAVPRLFGTIIDCCF
TNIQVAVTTVRTMTPCEETREIRYGEQKIPDYLDSQDLRGSFSMYYEEDL
KQQFKELEEGLNKLINVRKCIRDAHREDMIQIADKLDGNKKNAHIAKAIG
LFVSIGGGIVSIVGFGLMFTTFGASAVLIPLGAALGGTGGLTASISTFVE
YGIKRSTANDIKRMREEYETVVNEVFKSLQDIETTIENVWKWYHYVGKTG
KSVLVIVDVVVKLARLAVAIDNVSDVTATVFRTAGAAGRGLAIAGVVFSA
ILLPIDMVFFWYKYKEVKRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040459XLOC_040459Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064510TCONS_00064510Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003123VPS9
IPR008405ApoL
Vocabulary: Biological Process
TermDefinition
GO:0042157lipoprotein metabolic process
GO:0006869lipid transport
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
biological_process GO:0042157 lipoprotein metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008289 lipid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 404..424
NoneNo IPR availableCOILSCoilCoilcoord: 297..317
NoneNo IPR availableSUPERFAMILY109993VPS9 domaincoord: 87..265
IPR003123VPS9 domainSMARTSM00167vps9_2coord: 152..278
e-value: 0.0038
score: 4.5
IPR003123VPS9 domainPFAMPF02204VPS9coord: 151..264
e-value: 1.8E-17
score: 63.3
IPR003123VPS9 domainPROSITEPS51205VPS9coord: 113..269
score: 25.963
IPR008405Apolipoprotein LPFAMPF05461ApoLcoord: 329..516
e-value: 2.0E-11
score: 43.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064510-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top