TCONS_00064337-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064337-protein
Unique NameTCONS_00064337-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length707

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064337-protein ID=TCONS_00064337-protein|Name=TCONS_00064337-protein|organism=Clytia hemisphaerica|type=polypeptide|length=707bp
MSIPAATQRPNSPHHNPLLNIDRDMENQVARRRTQQHRQNLNVNPRDRLF
HALFMKIGHLYLRVVPKNFRLLLEIMVLLKAIFLFSVLTYLHFSFGRMPL
NCLNTTEGSWPRDGVLRVQIQPKVSLKHQIPRFFSSEENRVLFHPCHDEN
SPFTEQQCAELSTDMHAYYTYHSEKYNLLSQCYRMNLSDFLMQENFGDWK
LFENFEYIMTDKRGRTFKGFRPGDIIQEASLLTFYNLYLAFSEPERHYIF
EYAKEFGFLRLSPETRKRLKIPIKIVNLDPNKEKCLGDRMSRFILKYFLG
YDDIIMNSIKKISDADNNTGFMLNVMTGEHYKFVPWGIGRSSYFISLLLM
FLFTISISTLLRYCHQQVFFFIIHVLRMMDMNVVLAFPIAPLFTVILSLV
GMETIMSEYFNDTTISFYIILIVWAVDQFDSICCHTTTSQKYWLRFFYLY
HFIFYAYHYRFNGQYSSLALAATWFLIQHSMLYFFHNYELPSIEDQMHGR
RDEEAYLDEAVQMIVEGIEMVAGQNHQNDAENQPNNAEGGAQGETNNGTG
ANGGTGNSPQGVVAEDGQRVREISTNENGNRVFVFSGEGQFVQMVRDFIH
QVHQRVNVGVTGNTEQPETPINATEGAESSENTGTAPISVSENPRVEVDN
EFHYGPTQIRPELDVRVRSVADGDDSFSAFLETVSSATQVDSRGTASEDG
XTIFQPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040341XLOC_040341Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064337TCONS_00064337Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019144Membralin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019144MembralinPFAMPF09746Membralincoord: 43..441
e-value: 9.3E-125
score: 416.5

Blast
[Close]
BLAST of TCONS_00064337-protein vs. Swiss-Prot (Human)
Match: MBRL (Membralin OS=Homo sapiens GN=TMEM259 PE=1 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.559e-117
Identity = 166/313 (53.04%), Postives = 223/313 (71.25%), Query Frame = 0 
Query:  244 PERHYIFEYAKEFGFLRLSPETRKRLKIPIKIVNLDPNKEKCLGDRMSRFILKYFLGYDDIIMNSIKKISDADNNTGFMLNVMTGEHYKFVPWGIGRSSYFISLLLMFLFTISISTLLRYCHQQVFFFIIHVLRMMDMNVVLAFPIAPLFTVILSLVGMETIMSEYFNDTTISFYIILIVWAVDQFDSICCHTTTSQKYWLRFFYLYHFIFYAYHYRFNGQYSSLALAATWFLIQHSMLYFFHNYELPSIEDQMHGRRDEEAYLDEAVQMIVEGIEMVAGQNHQNDAENQPNNAEGGAQGETNNGTGANGGTG 556
            P+  YI EY+ E+GFLRLS  TR+RL IP+ +V LDP +++C GDR SR +L  FLGYDDI+M+S+K +++ + N GF+ NV++GEHY+FV   + R+SY  +  +M +FT+S+S LLRY H Q+F FI+ +L+M++MN+ +AFP APL TVIL+LVGME IMSE+FNDTT +FYIILIVW  DQ+D+ICCHT+TS+++WLRFFYLYHF FYAYHYRFNGQYSSLAL  +W  IQHSM+YFFH+YELP+I  Q+   R +E  L            +    N+ + A     ++ G          GA+G  G
Sbjct:  205 PQDEYIVEYSLEYGFLRLSQATRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYRFVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQV---RIQEMLLQAPPLGPGTPTALPDDMNNNSGAPATAPDSAGQPPALGPVSPGASGSPG 514

HSP 2 Score: 95.9005 bits (237), Expect = 1.566e-20
Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 0 
Query:   40 NLNVNP----RDRLFHALFMKIGHLYLRVVPKNFRLLLEIMVLLKAIFLFSVLTYLHFSFGRMPLNCLNTTEGSWPRDGVLRVQIQ 121
            NLN NP    RDRLFHALF K+   Y R+ P  FR L E  VLLKA+F+  VL Y+H  F R P+NCL      WPR+G+LRV+++
Sbjct:   31 NLNPNPLINVRDRLFHALFFKMAVTYSRLFPPAFRRLFEFFVLLKALFVLFVLAYIHIVFSRSPINCLEHVRDKWPREGILRVEVR 116
The following BLAST results are available for this feature:
BLAST of TCONS_00064337-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MBRL2.559e-11753.04Membralin OS=Homo sapiens GN=TMEM259 PE=1 SV=1[more]
back to top