TCONS_00064258-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064258-protein
Unique Name	TCONS_00064258-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	278

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064258-protein ID=TCONS_00064258-protein|Name=TCONS_00064258-protein|organism=Clytia hemisphaerica|type=polypeptide|length=278bp
IYILYSYLGKPKTANLDKCVIIIKIMFSFTAQPHKELPSFSVKSQRENFE
KWGMVQMNVQNFSYNNYFDLESKEDFVKAFFDDAVTKIAFKTFLKGSQCS
LGHMQPAKYVKVKHLLSTVTNMGFFDRLFKNSVVRSCGTIKKCFDEMIDD
VLISDELRKMMLTDESDYASLFTDEEKEEFIYAIFRHIVLGGYCNQYEDD
VQPYIDATKYVYKDLMRVVKDPKTKNLSILSTVLKVEMFDENGGMIFPGN
QSHAQNFCYFIINPEKCTILIWHHIRDL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040278	XLOC_040278	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064258	TCONS_00064258	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029416	DUF4498

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029416	Protein of unknown function DUF4498	PFAM	PF14926	DUF4498	coord: 29..274 e-value: 1.6E-76 score: 256.8

Blast

[Close]

BLAST of TCONS_00064258-protein vs. Swiss-Prot (Human)
Match: CK070 (Uncharacterized protein C11orf70 OS=Homo sapiens GN=C11orf70 PE=2 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 1.634e-51
Identity = 89/251 (35.46%), Postives = 142/251 (56.57%), Query Frame = 0

Query:   27 FSFTAQPHKELPSFSVKSQRENFEKWGMV-QMNVQNFSYNNYFDLESKEDFVKAFFDD--AVTKIAFKTFLKGSQCSLGHMQPAKYVKVKHLLSTVTNMGFFDRLFKNSVVRSCGTIKKCFDEMIDDVLISDELRKMMLTDESDYASLFTDEEKEEFIYAIFRHIVLGGYCNQYEDDVQPYIDATKYVYKDLMRVVKDPKTKNLSILSTVLKVEMFDENGGMIFPGNQSHAQNFCYFIINPEKCTILIWHH 274
            + F   P K   S S K       +W M+ ++  Q F ++  F    K+DFV AFF D   +  +   +   G    LG     K ++  ++  T  +M FF RL+   +VR  G I KC D   D  LISDELR+++L ++S+   +F+  ++EEF++ +F+H+ LGG   QYED + PY++ TK +YKDL+ V K+P+TK + I S+V KV  +D + GM +P  ++H Q F YFI++P +  + + +H
Sbjct:   12 YYFRFLPQKTFQSLSSKEITSRLRQWSMLGRIKAQAFGFDQTFQSYRKDDFVMAFFKDPNVIPNLKLLSDSSGQWIILG--TEVKKIEAINVPCTQLSMSFFHRLYDEDIVRDSGHIVKCLDSFCDPFLISDELRRVLLVEDSEKYEIFSQPDREEFLFCLFKHLCLGGALCQYEDVISPYLETTKLIYKDLVSVRKNPQTKKIQITSSVFKVSAYD-SAGMCYPSAKNHEQTFSYFIVDPIRRHLHVLYH 259

The following BLAST results are available for this feature:

BLAST of TCONS_00064258-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064258-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CK070	1.634e-51	35.46	Uncharacterized protein C11orf70 OS=Homo sapiens G...	[more]

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TCONS_00064258-protein (polypeptide) - C. hemisphaerica