TCONS_00064194-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064194-protein
Unique Name	TCONS_00064194-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1091

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064194-protein ID=TCONS_00064194-protein|Name=TCONS_00064194-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1091bp
FPEKLCGCCYERAWFAKSGGCSAIEFLMNNMPLQWVIEQQPMFISALMFV
MMDLTNEVSSGAVESAKRILEQLLRKCNEVKEEHTSTREQYFSIVVQNMV
REVVSPNHTVREQARHSLHVLSEVTSKSVHALMEPHKSLLEDMIPPKKHL
LRHQPVNTQIALMDGNTFCTSLTPRLFTMDLSIVEHKVFFTELYTLCEAD
DNTLMKLPCYKSVTSFVQLRVSALAALTSCHYIVQAREKIFNVLVKAINS
THAQVMQAGKENMKKFITGGALESVKELVSVNIRPLLLMLGDYRSLSISV
LQKLTCFMELFPELFNEKLCEQLLALLRRWMDTAISTANNENQQQVKPAV
RSTEEIKICSAIMNMFHLVPAASSKLIEPLITLTVKTERGLVLEIGSPFR
KPLVDFLLHYPQQTVDYFLLNIADPLINRLFVSVLKRDDTKPLRTALEGS
AVKLVSSTFISVAQNQGTEDQSPVAVQKRQQLQFQGILIIRTLVKFNSEW
LSQQPVLITHLRRIWNNHPLFDKARRLDTNNNEYWREIKLLAKCLLTYVT
HKSGETEVLFQLLKVHTVRSIPSFHFLKNFLQHICKNYTVEEKRNVFFKF
VECFQNQTFSQDIKAMILQHIIIPMFEESFKKGETDELVGTPPKPEVDIP
TNIIHVFVENIIDPGQPFATTDSVRILLLQFSALLVEHAGAHIHDAANRK
QGNKLKRLYIFAWPCLLSKQCVDPATKYHGFFLQAHIIIKFAIHKKFVLQ
VFHGLLKAHGQEARTIVRQGLDILTPVMPTRMEDGYAMLSHWTKKIIVEE
GHTLSQLVHVLQLLVRHHSVYYAVRMDLVQHMISSMQRLGFTQSATIEHR
KLAVDLAEVIIEWEKRRYKEEKAAENGGSSTTAGSGLKKTTPGGETPSTI
IGIKRASTDQNDGANKRARGITGQRGTDKLENLKAIFEKVVYDAVCNFLF
RVSCQVNEQSTSSSSPGEALSKRCFKLLQQCLKPFCWPDAELRITWLDKL
FLMLDQANSTNFANVTMALEILAWLCTVRNKQDLLAMFKTLQRGIITCTN
CSNVKVAKAAHGLXSHVPIARTSKSPKQLTVFSTNYWQSSR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040251	XLOC_040251	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064194	TCONS_00064194	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..90
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 3..394 e-value: 3.0E-8 score: 31.2 coord: 395..1088 e-value: 4.4E-7 score: 27.4
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 531..606 coord: 3..144 coord: 214..332

Blast

[Close]

BLAST of TCONS_00064194-protein vs. Swiss-Prot (Human)
Match: TRRAP (Transformation/transcription domain-associated protein OS=Homo sapiens GN=TRRAP PE=1 SV=3)

HSP 1 Score: 1048.88 bits (2711), Expect = 0.000e+0
Identity = 533/1096 (48.63%), Postives = 724/1096 (66.06%), Query Frame = 0

Query:    3 EKLCGCCYERAWFAKSGGCSAIEFLMNNMPLQWVIEQQPMFISALMFVMMDLTNEVSSGAVESAKRILEQLLRKC------NEVKEEHTSTREQYFSIVVQNMVREVVSPNHTVREQARHSLHVLSEVTSKSVHALMEPHKSLLEDMIPPKKHLLRHQPVNTQIALMDGNTFCTSLTPRLFTMDLSIVEHKVFFTELYTLCEADDNTLMKLPCYKSVTSFVQLRVSALAALTSCHYIVQAREKIFNVLVKAINSTHAQVMQAGKENMKKFITGGALESVKELVSVNIRPLLLMLGDYRSLSISVLQKLTCFMELFPELFNEKLCEQLLALLRRWMDTAISTANNENQQQVKPAVRST-----------EEIKICSAIMNMFHLVPAASSKLIEPLITLTVKTERGLVLEIGSPFRKPLVDFLLHYPQQTVDYFLL--NIADPLINRLFVSVLKRDDTKPLRTALEGSAVKLVSSTFISVAQNQGTEDQSPVAVQKRQQLQFQGILIIRTLVKFNSEWLSQQPVLITHLRRIWNNHPLFDKARRLDTNNNEYWREIKLLAKCLLTYVTHKSGETEVLFQLLKVHTVRSIPSFHFLKNFLQH-ICKNYTVEEKRNVFFKFVECFQNQTFSQDIKAMILQHIIIPMFEESFKKGETDELVGTPPKPEVDIPTNIIHVFVENIIDPGQPFATTDSVRILLLQFSALLVEHAGAHIHDAANRKQGNKLKRLYIFAWPCLLSKQCVDPATKYHGFFLQAHIIIKFAIHKKFVLQVFHGLLKAHGQEARTIVRQGLDILTPVMPTRMEDGYAMLSHWTKKIIVEEGHTLSQLVHVLQLLVRHHSVYYAVRMDLVQHMISSMQRLGFTQSATIEHRKLAVDLAEVIIEWEKRRYKEEKAAENGGSSTTAGSGLKKTTPGGETPSTIIGIKRASTDQNDGANKRARGITGQ-----------RGTDKLENLKAIFEKVVYDAVCNFLFRVSCQVNEQSTSSSSPGEALSKRCFKLLQQCLKPFCWPDAELRITWLDKLFLMLDQANSTNFANVTMALEILAWLCTVRNKQDLLAMFKTLQRGIITCTNCSNVKVAKAAHGLXSHV 1067
            E+LC CCYE+AW+AK GG  +I+FLM  +PL WV++ Q  F+ AL+FVMMDLT EVS+GAV  AK  LEQLL +C       E  EE  + +E+ F  V  ++VREV SPN TVR+QA HSL VL++VT KSV  +MEPHK +L+DM+PPKKHLLRHQP N QI LM+GNTFCT+L PRLFTMDL++VEHKVF+TEL  LCEA+D+ L KLPCYKS+ S V LR++AL AL +C+Y+ Q+REKI   L KA+NST++++ +AG+  M+KF+ G  +E   + +  ++RPLL+MLGDYRSL+++V+ +LT    LFP  FN+K C+Q++  LR+WM+  + T     +     ++              EE+KICSAI+N+FHL+PAA   L++PL+ + +KTER +++E GSPFR+PL+ FL  +P QTV+ F++   + DP  +R+F+S LK  D +PLR  L  +  + ++      AQ       SP     R  LQFQ I II  +VK +  WL+ Q  L++ LRR+W +   F +  R +      W+E KLLA CLL Y     G+ E+LFQLL+  T R + +  FLK +++  I KNY++ +KR +FF+FV+ F +  F  ++KA +LQHI+ P F  SF+KGE ++L+G PP PE D P +I  VF+  ++DP +     DS+RI LLQ++ LLVEHA  HIHD  N+ + +KL+RL  FAWPCLLSK CVDPA KY G  L AHII KFAIHKK VLQVFH LLKAH  EAR IVRQ + ILTP +P RMEDG+ ML+HWT+KIIVEEGHT+ QLVH+L L+V+H  VYY VR  LVQHM+S+MQRLGFT S TIE R+LAVDL+EV+I+WE +R K+++  ++     ++G G+   +           IKR  +  +    KR R  TG             G D L  L    +K   D V NFL RV+CQVN+ + ++ SPGE LS+RC  LL+  L+P  WP +EL++ W DKL + ++Q N  N+ N+   LE+L++L TV     +L+ FK LQRGI  C  C N KV +A H L S +
Sbjct: 1143 ERLCACCYEQAWYAKLGGVVSIKFLMERLPLTWVLQNQQTFLKALLFVMMDLTGEVSNGAVAMAKTTLEQLLMRCATPLKDEERAEEIVAAQEKSFHHVTHDLVREVTSPNSTVRKQAMHSLQVLAQVTGKSVTVIMEPHKEVLQDMVPPKKHLLRHQPANAQIGLMEGNTFCTTLQPRLFTMDLNVVEHKVFYTELLNLCEAEDSALTKLPCYKSLPSLVPLRIAALNALAACNYLPQSREKIIAALFKALNSTNSELQEAGEACMRKFLEGATIEV--DQIHTHMRPLLMMLGDYRSLTLNVVNRLTSVTRLFPNSFNDKFCDQMMQHLRKWMEVVVITHKGGQRSDGNESISECGRCPLSPFCQFEEMKICSAIINLFHLIPAAPQTLVKPLLEVVMKTERAMLIEAGSPFREPLIKFLTRHPSQTVELFMMEATLNDPQWSRMFMSFLKHKDARPLRDVLAANPNRFITLLLPGGAQT-AVRPGSPSTSTMRLDLQFQAIKIISIIVKNDDSWLASQHSLVSQLRRVWVSEN-FQERHRKENMAATNWKEPKLLAYCLLNYCKRNYGDIELLFQLLRAFTGRFLCNMTFLKEYMEEEIPKNYSIAQKRALFFRFVD-FNDPNFGDELKAKVLQHILNPAFLYSFEKGEGEQLLG-PPNPEGDNPESITSVFITKVLDPEKQADMLDSLRIYLLQYATLLVEHAPHHIHDN-NKNRNSKLRRLMTFAWPCLLSKACVDPACKYSGHLLLAHIIAKFAIHKKIVLQVFHSLLKAHAMEARAIVRQAMAILTPAVPARMEDGHQMLTHWTRKIIVEEGHTVPQLVHILHLIVQHFKVYYPVRHHLVQHMVSAMQRLGFTPSVTIEQRRLAVDLSEVVIKWELQRIKDQQ-PDSDMDPNSSGEGVNSVSS---------SIKRGLSVDSAQEVKRFRTATGAISAVFGRSQSLPGADSL--LAKPIDKQHTDTVVNFLIRVACQVNDNTNTAGSPGEVLSRRCVNLLKTALRPDMWPKSELKLQWFDKLLMTVEQPNQVNYGNICTGLEVLSFLLTVLQSPAILSSFKPLQRGIAACMTCGNTKVLRAVHSLLSRL 2219

The following BLAST results are available for this feature:

BLAST of TCONS_00064194-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064194-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TRRAP	0.000e+0	48.63	Transformation/transcription domain-associated pro...	[more]

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TCONS_00064194-protein (polypeptide) - C. hemisphaerica