TCONS_00064187-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064187-protein
Unique NameTCONS_00064187-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length410

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064187-protein ID=TCONS_00064187-protein|Name=TCONS_00064187-protein|organism=Clytia hemisphaerica|type=polypeptide|length=410bp
MADEMDAMLLSLLEKEIPEGRNALLDSHKNLSVLSNYCRENYANSPDKTK
ALEETKAYASQSLASVAYQIHSLAVNILQMMDQQAIQLNKMQSNANNIGL
IVDIHKEKVARREIGVLTSSKNFSRSHKIVAPTQQEKPQRYKREEIDYGC
LDHIGHGVKTDRGANEGYLQRRPSTSSSSGSVKGGVAASISSVHSSSQGS
IKGLQHQASITSSNQKLRQQESISRPPIAPVAPPMAPIHKVASPRAPNNP
APPPPTAPVAPVGVPKHVPEPPSPSDNIPMPPPPPAFNLPTRDYEEDDTS
QLPPPPPDLDDLYQIPPNNSLADLPPPPPELDSPTSPMGGAMPPPPPPPE
VSGPAKVVAIFNYTKLRDDELELLEGDVITIIKENDDGWIEGVKDGIQGL
FPGNYVTPYM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040245XLOC_040245Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064187TCONS_00064187Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR012849Abl-interactor_HHR_dom
IPR000727T_SNARE_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00499P67PHOXcoord: 377..393
score: 35.29
coord: 217..234
score: 27.78
coord: 393..406
score: 33.93
coord: 357..377
score: 45.24
NoneNo IPR availableGENE3D2.30.30.40coord: 35..378
e-value: 1.2E-11
score: 43.8
NoneNo IPR availableGENE3D2.30.30.40coord: 379..410
e-value: 5.9E-13
score: 47.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..185
NoneNo IPR availableCDDcd11826SH3_Abicoord: 356..407
e-value: 3.01385E-24
score: 93.1548
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 397..409
score: 43.82
coord: 355..365
score: 27.34
coord: 369..384
score: 34.02
IPR001452SH3 domainSMARTSM00326SH3_2coord: 355..410
e-value: 5.5E-17
score: 72.4
IPR001452SH3 domainPFAMPF14604SH3_9coord: 359..407
e-value: 3.8E-14
score: 52.2
IPR001452SH3 domainPROSITEPS50002SH3coord: 352..410
score: 15.136
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 343..408
IPR012849Abl-interactor, homeo-domain homologous domainPFAMPF07815Abi_HHRcoord: 99..162
e-value: 1.4E-28
score: 98.7
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 50..112
score: 10.025

Blast
[Close]
BLAST of TCONS_00064187-protein vs. Swiss-Prot (Human)
Match: ABI2 (Abl interactor 2 OS=Homo sapiens GN=ABI2 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.509e-58
Identity = 96/153 (62.75%), Postives = 118/153 (77.12%), Query Frame = 0 
Query:    7 AMLLSLLEKEIPEGRNALLDSHKNLSVLSNYCRENYANSPDKTKALEETKAYASQSLASVAYQIHSLAVNILQMMDQQAIQLNKMQSNANNIGLIVDIHKEKVARREIGVLTSSKNFSRSHKIVAPTQQEKPQRYKREEIDYGCLDHIGHGVK 159
            A L  LLE+EIP GR AL DS+ NL  +++YC  NY  S DK +ALEETKAY +QSLASVAY I++LA N+LQM+D QA QL +M+S+ N+I   VDIHKEKVARREIG+LT++KN SR+HKI+AP   E+P RY R+ IDY  LD IGHGVK
Sbjct:    2 AELQMLLEEEIPGGRRALFDSYTNLERVADYCENNYIQSADKQRALEETKAYTTQSLASVAYLINTLANNVLQMLDIQASQLRRMESSINHISQTVDIHKEKVARREIGILTTNKNTSRTHKIIAPANLERPVRYIRKPIDYTILDDIGHGVK 154

HSP 2 Score: 82.0333 bits (201), Expect = 6.668e-17
Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 0 
Query:  356 KVVAIFNYTKLRDDELELLEGDVITIIKENDDGWIEGVKDGIQGLFPGNYVTPYM 410
            KVVAI++YTK ++DEL   EG +I +IK+NDDGW EGV +G+ GLFPGNYV   M
Sbjct:  455 KVVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVESIM 509
The following BLAST results are available for this feature:
BLAST of TCONS_00064187-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABI21.509e-5862.75Abl interactor 2 OS=Homo sapiens GN=ABI2 PE=1 SV=1[more]
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