Spectrin domain containing protein (polypeptide) - C. hemisphaerica

Overview
NameSpectrin domain containing protein
Unique NameTCONS_00063903-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2274

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063903-protein ID=TCONS_00063903-protein|Name=Spectrin domain containing protein|organism=Clytia hemisphaerica|type=polypeptide|length=2274bp
MEISWLDEKENLLQNLAQPLTITEALSISKSLKMLQDQIRAHQSCLKNVV
TAGESCLNNDLVHQETVQNQLRLIQEKSESLNIILADKMISNDRQKDIFE
ALLMSDNHLEFIDNKLSTVMSNEYGTDLNSSDIAVKKHRKIKTDISNFKK
KLKPFLRDLNNLASNVSSAEVKTFTKGQPDSNNTERESEKSNLKELANLP
AEFGSTVLKQSAQIIKSKFKKLEQCSLYREKMLQDSNQLFTLYSEADQVK
TTILEIGKQIPSDEQNALTYDQANANNERIQFVKHKFQAAKVTYDKFSES
CKAFEQHPHHANITKVKNKVEIMYQKLGAKIESRSKKSNKLLMYHDFTNS
LGNINERLNEIQNSMKRSQRNLAKLESLSALREEVRRIGHVINDTRSLKE
GINKLAEKLSILATEYPGKSIKTFEQHVNALKSRYTECSKQLKILQVGLQ
IKIGRLTFNSDVQYLDGWLESTRAELNHLLDTAVDYSSTCLSIGDLEMKS
KEIALKKRLVDDLRRMVQDSKDQNENDKMKKQLLKLSKKHEEIEDLSNQT
SKVLKQKLEDLKLHRDLNAIGNALSSLQERVMLLGEKSKSQSHGSVLRKL
DEYSNILSSERMCTKQIKSSNDKGDSDVLENLEILDSKMNHIGELISKQR
SNIHARINLDKFQSLFGEVKEWLETTKNSLEDSSAIKNIKIATRGLCLIK
SQKVVTLAQYEELQTLRNYLLENKHALYLENEIETDKESPIASLDDLEEL
WKQLEKLTEKRASDIEEQKLLLGFEQTSVLITXQFYKTLLIVARMLFFIT
ATARTSTLIAFCTDRLLFIHYPIRYRRFATRRSYACAVVGIWLXVLITSH
LEDQISIVKNCGNEEDKTISSNDGVQFKLTTMESVKININKYSKQIEEFK
TDVSKYLHLNNELNPLVDSLEVRLGEAHRLHEETVKQLRQTELKGNFHLL
HEELKEKTKTLDVRLNATPVCTDERSICRLQKTQLSFQSEIVSLKTRTDD
LRLIAGQLEMDEGHLARDNKLVGLDQDILELNEKVKRMKLTLEAQSKLHS
FFEETKKFLKWVEKVTSKIERLSQETTFDLESRLRSLSDFQLQLSNKREN
MLALSERGQTLVQDGQLSSMEVESRLGEIKTGLQRFEQLLKITEESSYKN
ISFNKLKQKFSSTMTWLQEQTNFLQSLKLDDVQSFEEVQDVKRNLKMLQS
RAGKHQDMTNDLTRMFQNLSTVDLQKAGFELDELKERFELLKFELDEKLH
EVENAEEMFKLFTKYCTLTDWINKKTEKLMDISNQLNLKHRDIVISMEQE
LDAKESLVNTILKGVEEHRHHALFSEQNLRIRPIQNREGFQHLKSSVKDL
LSRLSSMTNEKSLVDDLKILEDAIEITTQRLRKITFCTSDIEMSKAERDG
MEIKGLLSSYDEQWTELLERANDMLLPEELNSKIEELTRKLSAIREDITA
KEGELIQKNIQYLALHKRMETEELWFNSKQTFIKSHIPSDYNNLVKWEEE
FIGIKQEFHCKRKQTITLVETVENLLKSIDSKDSAEFHQHIAINVGSFRR
RFENFEDEVKSSEKVLGELLRVNQIILRLDDVHSRYEELCEKAQDISTGQ
DLQAAQVMLQKHEFNKSQHESYESRFAELKMEYLEVKECSCLGAYEELLN
SITEKFNDLQILKSEVHSLMKNRSKTLKTTFQFFQFRSELSFLDAWIQGQ
IDDIKTDGIGNTTAECEHLIRETESFARNLMAREERVAQFGVLSQDMVNS
RPLSAKQIMKNTSNIYELWNDVKDLLQTRLETLDQGLHSHRFRDKILVLN
QWTNEIQAKLTIIKIQDGSEETRQILEDMKGQHGTILSKLEIMESEKERL
RLNIEACEVLVAHSMETLAQDLRKLKMLIDSKENLLNEVMDFHDFKKQLS
DLESWMERTSKRTQAYMNDVTETVSRKHVHDELSSEIESRRQYVTELQLK
KQNDFHCFTKDNLDVLTNCWCSFERKWHALQSQVRMLGDLVENTDGLNHI
LNDFDAIESWLDEQEKKIYLEPSNKLNDSLDESGFENGFLENALSNQNEL
EEFLKIQDEKVRSTCDKIDSFKMVKTGDNDSTDMTCSSEVQIIEKALQLE
NQVEDTPSNGGLDDSEPSNHSNEINNNETTGTDSLRDIPQTSPSKPDKVL
IGLLKKSRTPSNSKKRVVFSTTHEFSDCVTIQQFSKLNDEYEQEQHYFYE
DDDDDYDNYADGNYANYVDDDHWEDDGIVFSEEALSPSYYPEPPEEFLHL
SDSDEDEDDDCWDKDYFIASTTTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040058XLOC_040058Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063903TCONS_00063903Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018159Spectrin/alpha-actinin
IPR002017Spectrin_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1840..1860
NoneNo IPR availableCOILSCoilCoilcoord: 882..902
NoneNo IPR availableCOILSCoilCoilcoord: 526..549
NoneNo IPR availableCOILSCoilCoilcoord: 1231..1258
NoneNo IPR availableCOILSCoilCoilcoord: 1865..1885
NoneNo IPR availableCOILSCoilCoilcoord: 1434..1454
NoneNo IPR availableCOILSCoilCoilcoord: 1028..1048
NoneNo IPR availableCOILSCoilCoilcoord: 351..378
NoneNo IPR availableGENE3D1.20.58.60coord: 1899..1972
e-value: 0.0038
score: 17.0
NoneNo IPR availableGENE3D1.20.1070.10coord: 770..870
e-value: 5.4E-7
score: 28.3
NoneNo IPR availableGENE3D1.20.58.60coord: 1246..1457
e-value: 0.072
score: 12.7
NoneNo IPR availableGENE3D1.20.58.60coord: 670..767
e-value: 0.066
score: 12.9
NoneNo IPR availableGENE3D1.20.58.60coord: 1800..1898
e-value: 1.6E-7
score: 30.9
coord: 369..466
e-value: 4.4E-5
score: 22.9
coord: 268..368
e-value: 0.0048
score: 16.3
coord: 587..669
e-value: 3.5E-4
score: 20.0
coord: 1695..1799
e-value: 6.4E-14
score: 51.6
coord: 98..263
e-value: 4.3E-5
score: 23.0
coord: 1585..1694
e-value: 5.4E-6
score: 25.9
NoneNo IPR availableGENE3D1.20.58.60coord: 1..97
e-value: 1.2E-4
score: 21.6
NoneNo IPR availableGENE3D1.20.58.60coord: 467..558
e-value: 0.0026
score: 17.5
NoneNo IPR availableGENE3D1.20.58.60coord: 1134..1227
e-value: 0.001
score: 18.6
coord: 1973..2109
e-value: 0.01
score: 15.3
coord: 1020..1133
e-value: 1.4E-9
score: 37.5
coord: 898..1019
e-value: 0.15
score: 11.5
NoneNo IPR availableGENE3D1.20.58.60coord: 1458..1584
e-value: 0.0027
score: 17.4
NoneNo IPR availableCDDcd00176SPECcoord: 1047..1255
e-value: 8.51419E-9
score: 55.5296
NoneNo IPR availableCDDcd00176SPECcoord: 1682..1890
e-value: 5.10525E-12
score: 65.5448
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 784..849
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 1862..1981
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 201..321
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 1682..1785
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 402..554
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 1518..1659
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 3..87
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 1154..1261
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 1024..1141
IPR018159Spectrin/alpha-actininSMARTSM00150SPEC_4coord: 1684..1784
e-value: 6.7E-10
score: 48.9
coord: 1154..1253
e-value: 3.8
score: 4.0
coord: 99..234
e-value: 3.7
score: 4.1
coord: 1573..1678
e-value: 4.8
score: 2.9
coord: 1049..1149
e-value: 0.43
score: 14.4
coord: 240..373
e-value: 1.1
score: 10.0
coord: 1893..1985
e-value: 2.7
score: 5.6
coord: 945..1043
e-value: 8.2
score: 0.3
IPR002017Spectrin repeatPFAMPF00435Spectrincoord: 1683..1784
e-value: 2.3E-10
score: 40.8

Blast
The following BLAST results are available for this feature:
BLAST of Spectrin domain containing protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top