TCONS_00063636-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063636-protein
Unique NameTCONS_00063636-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length311

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063636-protein ID=TCONS_00063636-protein|Name=TCONS_00063636-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MPKKKTGARKKAEKQKQRQKDIQSGSKTISITKYPCNFIMECDKCGRMQK
NRAYCYFCYYIQKLPVCGQCGKQKCMMKSGDCVVKHAGVHTTGMQMVGAI
CDFCEAWICHGRKCLQSHACVCPLTDAICLECDRGVEGQGGRIFVCAFCD
KFLCEDDQFEHQAKCQIIESETLKCASCNKNGQHSCLRCKVCYCDDHVWR
KGFKYTKGQLPPCPKCGFEMKETKNLSMSTRQHDYGRQRADKYDDDYGDD
YYSYDNSAAMSFSGFGGVSYNPDDGDDDDEDYSTEDESSLENESESDEEN
ELEQAMGKLEI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039887XLOC_039887Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063636TCONS_00063636Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010531NOA36
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010531Zinc finger protein NOA36PFAMPF06524NOA36coord: 1..303
e-value: 2.5E-143
score: 477.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Blast
[Close]
BLAST of TCONS_00063636-protein vs. Swiss-Prot (Human)
Match: ZN330 (Zinc finger protein 330 OS=Homo sapiens GN=ZNF330 PE=1 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 1.320e-127
Identity = 173/272 (63.60%), Postives = 207/272 (76.10%), Query Frame = 0 
Query:    1 MPKKKTGARKKAEKQKQRQKDIQSGSKTISITKYPCNFIMECDKCGRMQKNRAYCYFCYYIQKLPVCGQCGKQKCMMKSGDCVVKHAGVHTTGMQMVGAICDFCEAWICHGRKCLQSHACVCPLTDAICLECDRGVEGQGGRIFVCAFCDKFLCEDDQFEHQAKCQIIESETLKCASCNKNGQHSCLRCKVCYCDDHVWRKGFKYTKGQLPPCPKCGFEMKETKNLSMSTRQHDYGRQRADKYDDDYGDDYYSYDNS-AAMSFSGFGGVSYN 271
            MPKKKTGARKKAE +++R+K +++   TI + K+PCN  MECDKC R QKNRA+CYFC  +QKLP+C QCGK KCMMKS DCV+KHAGV++TG+ MVGAICDFCEAW+CHGRKCL +HAC CPLTDA C+EC+RGV   GGRIF C+FC  FLCEDDQFEHQA CQ++E+ET KC SCN+ GQHSCLRCK C+CDDH   K FK  KG+ PPCPKCG E +ETK+LSMSTR   +GRQ       + GD    YD     +S   +G  SY+
Sbjct:    1 MPKKKTGARKKAENRREREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCNSVQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHACACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNRLGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQTG----GEEGDGASGYDAYWKNLSSDKYGDTSYH 268
The following BLAST results are available for this feature:
BLAST of TCONS_00063636-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN3301.320e-12763.60Zinc finger protein 330 OS=Homo sapiens GN=ZNF330 ... [more]
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