TCONS_00063594-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063594-protein
Unique NameTCONS_00063594-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length119

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063594-protein ID=TCONS_00063594-protein|Name=TCONS_00063594-protein|organism=Clytia hemisphaerica|type=polypeptide|length=119bp
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFN
TFFSETGAGKHVPRAVFVDLEPTVVGKKNLFGNLLISLVEFQKLRKILXI
QHFIVEKIAVFGNNFRKEQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039857XLOC_039857Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063594TCONS_00063594Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000217Tubulin
IPR002452Alpha_tubulin
IPR003008Tubulin_FtsZ_GTPase
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0005200structural constituent of cytoskeleton
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007017 microtubule-based process
cellular_component GO:0005874 microtubule
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005200 structural constituent of cytoskeleton
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000217TubulinPRINTSPR01161TUBULINcoord: 53..72
score: 68.27
coord: 10..30
score: 69.11
IPR002452Alpha tubulinPRINTSPR01162ALPHATUBULINcoord: 18..33
score: 95.27
coord: 45..58
score: 84.51
IPR003008Tubulin/FtsZ, GTPase domainPFAMPF00091Tubulincoord: 3..76
e-value: 2.9E-19
score: 70.0
IPR003008Tubulin/FtsZ, GTPase domainGENE3D3.40.50.1440coord: 1..119
e-value: 4.7E-33
score: 114.2
IPR003008Tubulin/FtsZ, GTPase domainSUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 1..77

Blast
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BLAST of TCONS_00063594-protein vs. Swiss-Prot (Human)
Match: TBA3E (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.248e-50
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 75
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 75
The following BLAST results are available for this feature:
BLAST of TCONS_00063594-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBA3E2.248e-50100.00Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E P... [more]
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