TCONS_00063532-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063532-protein
Unique NameTCONS_00063532-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063532-protein ID=TCONS_00063532-protein|Name=TCONS_00063532-protein|organism=Clytia hemisphaerica|type=polypeptide|length=169bp
MTTIRAQKDLILLYNDETFKQPTETIDWLNARRWISAHHHVRCPRRVFKR
KLLSARYHDDPNYEGPDRMSDFARLARVLTGTAVGLVLGGGGARGISHVG
IIKRMLEAGIPIDRVGGTSMGAFIGAIYAEHGSIVRTTQRAREGCLKMAS
MWRKLLDMTYPYTSLFTGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039826XLOC_039826Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063532TCONS_00063532Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002641PNPLA_dom
IPR001423LysoPLipase_patatin_CS
IPR016035Acyl_Trfase/lysoPLipase
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0046470phosphatidylcholine metabolic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004622lysophospholipase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0046470 phosphatidylcholine metabolic process
molecular_function GO:0004622 lysophospholipase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002641Patatin-like phospholipase domainPFAMPF01734Patatincoord: 86..153
e-value: 2.0E-12
score: 47.6
IPR002641Patatin-like phospholipase domainPROSITEPS51635PNPLAcoord: 86..169
score: 19.578
NoneNo IPR availableGENE3D3.40.1090.10coord: 77..169
e-value: 8.4E-17
score: 60.7
IPR001423Lysophospholipase patatin, conserved sitePROSITEPS01237UPF0028coord: 89..121
IPR016035Acyl transferase/acyl hydrolase/lysophospholipaseSUPERFAMILY52151FabD/lysophospholipase-likecoord: 80..168

Blast
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BLAST of TCONS_00063532-protein vs. Swiss-Prot (Human)
Match: PLPL6 (Neuropathy target esterase OS=Homo sapiens GN=PNPLA6 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 9.571e-55
Identity = 95/172 (55.23%), Postives = 121/172 (70.35%), Query Frame = 0 
Query:    2 TTIRAQKDLILLYNDETFKQPTETIDWLNARRWISAHHHVRCPRRVFKRKLLSARYHDDPNYEG-----PDRMSDFARLARVLTGTAVGLVLGGGGARGISHVGIIKRMLEAGIPIDRVGGTSMGAFIGAIYAEHGSIVRTTQRAREGCLKMASMWRKLLDMTYPYTSLFTG 168
            T +RA K L+LL+ +E    PT T++WLN R W S H H+RCPRR+F R+   A+ H+   YE       DR SDF+RLARVLTG  + LVLGGGGARG SH+G++K + EAG+P+D VGGTS+G+FIGA+YAE  S  RT QRARE    M S+   +LD+TYP TS+FTG
Sbjct:  887 TAVRALKQLVLLHREEG-AGPTRTVEWLNMRSWCSGHLHLRCPRRLFSRRS-PAKLHE--LYEKVFSRRADRHSDFSRLARVLTGNTIALVLGGGGARGCSHIGVLKALEEAGVPVDLVGGTSIGSFIGALYAEERSASRTKQRAREWAKSMTSVLEPVLDLTYPVTSMFTG 1054
The following BLAST results are available for this feature:
BLAST of TCONS_00063532-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLPL69.571e-5555.23Neuropathy target esterase OS=Homo sapiens GN=PNPL... [more]
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