TCONS_00063389-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063389-protein
Unique NameTCONS_00063389-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length222

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063389-protein ID=TCONS_00063389-protein|Name=TCONS_00063389-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
PRFMMGKEEDIKATAYEKLLAETKKMLRDLEDYWYLLPNQICSAGIASPN
NTNCWNGQNTNGYTKPVVKGNLKDLFNSNPEMDLTSKSKEYDSGVLTLEA
KLQDIIIQIDSVMRGNGIVQPDTEASGSGSGDDSSGDNDNEGSGERPATT
EEPEEGSATGSGDDSSGDNDNEGSGERPATTEEPEEGSATGSGDGKNGGG
TTFTTNFSFISTLAVLIVYWIW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039723XLOC_039723Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063389TCONS_00063389Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001863Glypican
Vocabulary: Molecular Function
TermDefinition
GO:0043395heparan sulfate proteoglycan binding
Vocabulary: Cellular Component
TermDefinition
GO:0005578proteinaceous extracellular matrix
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
cellular_component GO:0005578 proteinaceous extracellular matrix
molecular_function GO:0043395 heparan sulfate proteoglycan binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001863GlypicanPFAMPF01153Glypicancoord: 8..178
e-value: 5.2E-20
score: 71.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..199

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063389-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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