TCONS_00062879-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062879-protein
Unique NameTCONS_00062879-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1907

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062879-protein ID=TCONS_00062879-protein|Name=TCONS_00062879-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1907bp
MAMILLNFQFLVTFFLLIQQCHTLYRRPKDRITGCLRCVGRNELLDIDAG
TLTTTNDHEDNGYCRNIYSMIGRVLHSRDYTCTYSTNTLMVSYIKFRSYF
QLNQVTYYHNHFALNNAPDVVKFGLGSDTRLIGITKSLSVFNHGRLARTS
NPHSWAVNEPVATNELVFFLKLTINQHFRLTMLGCRFTDYAPALLSTTPI
DSFGLISHGGINPYPQDLTSCIIDNVGEGYLPIRNGDGVNTAIDSTFYYI
QVDFPVTYKVVRIDRQVKKGGTTGGAFIQFGQDENTLDFFKGPTNTVEQL
VPSEDDWMDYLTVTDTFVQPLIGKMFRYVPRCTPGQCYASKIQFYGVPLT
TPDHHWPLMGHGRDEYRIHDLVNSPSSSFDGFVYDVPEDVPSRSVEFVDP
DDCLFDPKNCKDGLAIEFSIQDVQPNPRKMSVVIPSSKVFNIAASGTCTT
NDGAQVDLNFKFGVFVELGENMLLRGMDIDVMLVNENQVDGTDGAQYQIN
AKIFLGKDEAYATACQFDVADAYASRDITVKIEGAKISFLLDATIEEAIK
DLAFWYHRTIFIYFTPIDGQNINGKLDTSSQMKLEASYHFRCQKTLKSYA
LKSADWFQDNGCHSANDARVSKPHISWEACNLPSSSLIMAFKDPILLKSF
EIMGSGRGEFNTVTSFKMEYKFRIQTESIDHQVFDWRPYQLNGQDYIFKR
RLTKSQQMPEIVPLPYAVFVTNVKVIPLDYIGLGADLRIDVHVCQLDEYV
TEREMWHKLNSDNVCFGLKGKNPGRFSSEKGVEATFIKLVHKSGTVGAGD
YPTQFWNHRDEEQIAIYLTNKDDEVVAPAGLPLGATPSHDFHSNNLPTDP
EITLALQGPTYFRNKEKLRVWYAMDLNGQVADMGTNQICVDVYGWGKTYN
YHGMHRISSPNLPRRCVYRPSNKLRVHEDACSSSEHHFFFDVFGYLHWNE
FHLYVKINGNSLVATDAKHVKHQISTNDWIDYRPNVANKKWYVKRLSDGT
IYYAHVDDNNDAEIELRSDSWTQFGFHPADRSFYQYYRDDSVTKTEPGNF
DAVKTACEASGGTLVEPRSFDEMELLAEKFTAADSDIWHIGVTAMSSNTK
YRFISGNPFPNKLFNPGDGLNTGEDAVFYQPASKMCVDYVTTAVRRGICE
ATDPQWRGIKYGQFFENEQFFPLLSFNMDMKKTFHTGKGFHISYSYKSKK
LFVVISSNFKYRLTVENQEITSRTTFLVVQKKTDNETYIRLYKDGVQIGE
NITATSAINPLNEGFFNYTIFGQSYHDFYPNLKFKMDNVKIWKHFVEPDE
IIASSAIDLKDFSDHNEFYGREEQGYIIKSSCLDSDLKDGLCRDRTASNG
FVKETTEIPDSLPDISGEGFTELQIDPIDKLIYFLSSSGPVYKMASHNST
ELEKYCSGKSVSKIQVDYLGVLYAHGSDNKIYKCEAGSWQEVTVDRPCHS
LQFKFETKYVREGNKWYKITDLASGSTEEVWNGANGDFFFSHSKEPFYYV
NHGSSLKRIHKDGLNSVDLSSLSPVKIFVTFSERIFFTESSKIVFRYERN
EFSTNYHDNQRSYWTAVSYDIRDIVFCDALGDFVVCIRENDILTKFSFPD
SVEPKKISRFIAPRLFRRTISTTSDWQQFRSSDENAWFLKNPAAGSRYFT
FLRFDIQLPAGAVVSLARILGKTSITTTGRYNVSISLVESLTISEQDDIT
DFAPVDGVFWYTRELATESHFVTQNIAQLVQYASDKRKQIRTDGDDLAIM
LAFTHQDPAGLNKLAKMLLENMILEVYYQSPSKNKYVGFPYSPTPRGSIY
TSTTHVRAQKISFWVYFHGESLLVLWKINSDLTRDMVYTTSSSSFSSDVW
HEINLALDAGTIYPMKVEFQVFTNNDDSQVGIDDVKFLAENTGSLTPFTS
TYNYRET
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039387XLOC_039387Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062879TCONS_00062879Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 1741..1896
e-value: 1.5E-4
score: 22.0
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 1004..1153
e-value: 2.9E-8
score: 33.3
NoneNo IPR availableGENE3D2.60.120.200coord: 1160..1308
e-value: 5.3E-7
score: 29.1
NoneNo IPR availableCDDcd00037CLECTcoord: 1045..1150
e-value: 2.94279E-8
score: 53.0074
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 1019..1151
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 1185..1309
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 1808..1889

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062879-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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