TCONS_00062844-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062844-protein
Unique NameTCONS_00062844-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length716

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062844-protein ID=TCONS_00062844-protein|Name=TCONS_00062844-protein|organism=Clytia hemisphaerica|type=polypeptide|length=716bp
MKEMENNNETQIEEKSADNNAWDKAQNALKDLQANKNKPKHNGMNGGYAN
PYSNGMIGNGYPPYNNFNPHFNGPPPGSYYNQPPPGPYQRMPYNPSYQGY
QNNYMPQYGNHGPYNGRPRFNGPPPANYINNNIQGGYYGAPINQQNGGPP
LKNIQNQNNMKDKSKQEEFKEKVIEKPKSFADALKHNKMWKQKSTMNFKQ
SNDMNPQNKGWASGGFLKVGEKPNDGEPDANTNVEKREREDLKNGDQNTD
EPKAKHTKPTTPLKSENNKKKEWPEAMKTWVRESFEQCGSERIKDKMEEK
LKTFVNQVISDGSAWTINWQLKALFKTPPKGYERSSRSSYRNTGSRSRSR
SRSRSNTPTRRPSHRRSSSSGGSSNDSLENVRPAFSKKMKNRLGKKMIKN
SNNNIMAKSKSTPNMKQFKIENDTEVTQKKQDRAARFQKDFKKSSSFNSS
NLIPKGESPMDEDVDMNFHINGYCQDLTKPYLRLTSAPDPSTVRPVNILK
KSLEHVETQWKKKNDYHFACEQMKSIRQDLTVQGIENEFTVTVYETHARI
ALEKGDREEFNQCQTCLRRLYSKGINGQVAEFTAYSILYYIYTKSTLDLN
SCLASLTKDLKKDALVQHALSVRSALALDNYRSFFKFYLQAPKMGGSLID
LFIARERKEALKRLVKAYRPSLSVAHITTQLAFKSEDECLAWLQELNITF
LANDPTKVDCKASVVT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039362XLOC_039362Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062844TCONS_00062844Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005062SAC3/GANP/THP3
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..460
IPR005062SAC3/GANP/THP3PFAMPF03399SAC3_GANPcoord: 485..700
e-value: 8.1E-25
score: 87.7

Blast
[Close]
BLAST of TCONS_00062844-protein vs. Swiss-Prot (Human)
Match: LENG8 (Leukocyte receptor cluster member 8 OS=Homo sapiens GN=LENG8 PE=1 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 5.642e-86
Identity = 147/271 (54.24%), Postives = 176/271 (64.94%), Query Frame = 0 
Query:  399 KNSNNNIMAKSKSTPNMKQFKIENDTEVTQKKQDRAARFQKDFKKSSSFNSSNLIPKGESPMDEDVD-MNFHINGYCQDLTKPYLRLTSAPDPSTVRPVNILKKSLEHVETQWKKKNDYHFACEQMKSIRQDLTVQGIENEFTVTVYETHARIALEKGDREEFNQCQTCLRRLYSKGINGQVAEFTAYSILYYIYTKSTLDLNSCLASLTKDLKKDALVQHALSVRSALALDNYRSFFKFYLQAPKMGGSLIDLFIARERKEALKRLVKAY 668
            +   +++    +S   M   + E D E   KKQ RAARFQ    +        L          D D     I G C D+TK YLRLT APDPSTVRPV +LKKSL  V+  WK+K DY FACEQMKSIRQDLTVQGI  EFTV VYETHARIALEKGD EEFNQCQT L+ LY++ + G V EFTAY ILYYI+TK++ D+ + LA LT++LK D  V HAL++R+A AL NY  FF+ Y  AP M G L+D F  RERK ALK ++K Y
Sbjct:  442 RGKRHDLAPTKRSRKKMAALECE-DPERELKKQKRAARFQHGHSRRLRLEPLVLQMSSLESSGADPDWQELQIVGTCPDITKHYLRLTCAPDPSTVRPVAVLKKSLCMVKCHWKEKQDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQLKSLYAENLPGNVGEFTAYRILYYIFTKNSGDITTELAYLTRELKADPCVAHALALRTAWALGNYHRFFRLYCHAPCMSGYLVDKFADRERKVALKAMIKTY 711
The following BLAST results are available for this feature:
BLAST of TCONS_00062844-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LENG85.642e-8654.24Leukocyte receptor cluster member 8 OS=Homo sapien... [more]
back to top