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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00062747-protein ID=TCONS_00062747-protein|Name=TCONS_00062747-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1966bp
MKTGDIFSSKSYVFLPLLTMFISGEEFEFIPPPEAPVFEPDEEEWKDPLG
YIAKIHPYAVKVGICKIRPPPDWQPPFSIDVDNFKFTPRIQKLNELEAKT
RVKLNFIDAIAKFWDLQGNQIKLPNVEKKPLDIHTFHKIVQAEGGFEDVT
RLRRWTRVAALMNYTAPATSGILRRHYEKILYPYDIFMSGAMIGGDTPTE
KSTTPMSKQEMKQMKNDPEYKPNGDDDVMETSSIHTRLSRNKQLEDEGIE
EDCKIDYTKNPELRKLQFSAPGPKITGRRNKKVSDKYNAKDYETNLQKGG
KNVNRFNFHSFIDDYKCRVCENGDDEDCMLLCDQCDASYHTFCLIPPLAG
IPPGDWRCPKCVAKECNKPLETYGFEQAKKIYTLEDFSEMADKFKEDYFS
MPPTEVPVRVVEKEFWKLVSSIDHDISVEYAADLHTADHGSGFPTEKNSG
VFSDTSEYINSPWNLNNFPNNEKSVLKYITQDISGMKVPWIYVGMCFSSF
CWHTEDHWSYSINFHHWGEPKTWYGVPQSEAERLESCVKEIAPELFERNP
DLFHHLVTLCSPMTLMKHGVPVFRTNQYPGEFVVTFPRAYHAGFNTGYNC
AEAVNFCPAEWLPSGQECVKHYQKMRRVTVFSHDELLFKMASIPDALELD
LAKKLYDCMRDVVDAEIDARHRMSRLGIMDKQREAYELINDDERQCDYCK
TTIFLSGVACACDKKRLTCLNHWDKPCGCGSSKKYIRFRYTLRELPKILA
DLKKRADSFDNWEIAVHKVLSKTDATKIEFTALKDYITEAEESQFPECEL
LDQLRVYVSEAEQCSQVANQLLTKKHKTRKTSTGPTPSSPRLTLNELRDF
VNQIDNLPCIIKEAAAIDKLMAQVESFRYDAKLVLNSDDYNEKKVLELLE
HAETMDVDLPEINDLRLDLKASKWLESIDEILNQEDPISLDVIRSCVDQG
IGLRKKQASEKPLSRLKELLYAADRWEEKAKLCLQAKPRHMVGTLEVIVQ
EASKVKIILPNVSALKDALFKAKDWTSKVERVHNDQYYPYYDILEALVVK
GRPIPVRLEQLPQMESQVAAARAWKDRTSRTFVKKASNKLLMELLQPRKD
IGKFDKKPKKKKSIEKPAKTPTDTKHSKKDKIMLSTSSTTSKKDEKSVHK
DGKTKSKVKVKEEVIDSPSAGTDDDKIKEEDKRPIGIPVETINVDDYKAP
DPLTVAQNLKDDEVIELAAMKELREKNKQKLVEENIEGPYCLCRKGIDGF
MIRCNLCFNWYHTSCICPPKTVYGKPIGKGYNSWTATREVHYLCTQCCRS
RRPRLDNILQLLMSLQKLPVRVPEGEALQFLTERAMNWQDRAKQALSNPE
ISRIITEAKAQVEKILAEKQLLSSANTNHNGTQMNIMFYQRLLQVKKVHI
EKVTEVTSEEEKTKEAETKNEQKTSESAKTISVENATKDDENAIKELDAP
FKASSTEVPIEMASLAEPSISVSNATTSNDKDIIMKSPSKSNPTPTTPTT
KTPTPTTLSLQQTPKKDKPTEMTTSGVGDELECTEEMSSGSPVSSSKTPN
LSDPNVVRIQSASSSRAQSPIDVCTPLDNLATPKPAAPVPSTPLVLTMNQ
LENDVLDHLENLMFEGELLEVGLDEVQQIWAILQIQRPMLKEECNIMNAD
YRRKLIKDRKKQRKRKLEEAKAAQQAAALAAKQKHTAALAAASATKISLP
SLTTKSANVPNKKIKLEEVKIKVEPMDEVMPAEVTKSPTTTTDSANLDES
QDEDDCSARPCKKPLGDEVEWVQCDKCESWYHIICVGISAQDANNIEEYV
CPFCCPPPPKPEKKPATKTTKEASKTGPTTSSPLKKSNIENTVKIESNKI
PDLSVIAEVAHQIISGQEKANSQGVTPMEVDPPSVAPIPLPPPLPPSNLD
LNSLAFLAEMSEKMDVTPIKEVTSAVPLPTSTEVSEPLIKDSEKITSSPV
KEQIPAPPAKQTSPNK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0016706 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0016706 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1406..1426 |
| None | No IPR available | COILS | Coil | Coil | coord: 1328..1348 |
| None | No IPR available | COILS | Coil | Coil | coord: 1653..1684 |
| None | No IPR available | SMART | SM01014 | ARID_2 | coord: 97..185
e-value: 4.5E-29
score: 112.6 |
| None | No IPR available | GENE3D | 1.10.150.60 | | coord: 77..221
e-value: 1.5E-24
score: 85.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1923..1966 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1102..1177 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1471..1554 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1811..1837 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 196..226 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1404..1450 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1727..1759 |
| None | No IPR available | CDD | cd15610 | PHD3_KDM5A_like | coord: 1755..1800
e-value: 2.06868E-21
score: 89.694 |
| None | No IPR available | CDD | cd15515 | PHD1_KDM5A_like | coord: 316..361
e-value: 6.20015E-25
score: 99.7743 |
| None | No IPR available | SUPERFAMILY | 51197 | Clavaminate synthase-like | coord: 454..659
coord: 367..426 |
| IPR001606 | ARID DNA-binding domain | SMART | SM00501 | bright_3 | coord: 101..190
e-value: 3.2E-24
score: 96.5 |
| IPR001606 | ARID DNA-binding domain | PFAM | PF01388 | ARID | coord: 103..185
e-value: 1.2E-14
score: 54.6 |
| IPR001606 | ARID DNA-binding domain | PROSITE | PS51011 | ARID | coord: 100..189
score: 24.591 |
| IPR001606 | ARID DNA-binding domain | SUPERFAMILY | 46774 | ARID-like | coord: 80..190 |
| IPR003349 | JmjN domain | SMART | SM00545 | JmjN_1 | coord: 34..75
e-value: 3.7E-20
score: 83.0 |
| IPR003349 | JmjN domain | PFAM | PF02375 | JmjN | coord: 36..69
e-value: 1.0E-13
score: 50.8 |
| IPR003349 | JmjN domain | PROSITE | PS51183 | JMJN | coord: 35..76
score: 16.654 |
| IPR001965 | Zinc finger, PHD-type | SMART | SM00249 | PHD_3 | coord: 1761..1805
e-value: 8.3E-6
score: 35.3
coord: 316..362
e-value: 3.3E-12
score: 56.5
coord: 1240..1298
e-value: 2.0E-4
score: 30.7 |
| IPR003347 | JmjC domain | SMART | SM00558 | cupin_9 | coord: 457..623
e-value: 1.4E-61
score: 220.6 |
| IPR003347 | JmjC domain | PFAM | PF02373 | JmjC | coord: 490..606
e-value: 3.8E-42
score: 143.2 |
| IPR003347 | JmjC domain | PROSITE | PS51184 | JMJC | coord: 457..623
score: 40.095 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 1650..1814
e-value: 6.8E-14
score: 51.3 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 1216..1309
e-value: 4.3E-9
score: 35.6 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 312..365
e-value: 8.3E-14
score: 50.7 |
| IPR013637 | Lysine-specific demethylase-like domain | PFAM | PF08429 | PLU-1 | coord: 761..1088
e-value: 2.6E-78
score: 263.4 |
| IPR019787 | Zinc finger, PHD-finger | PFAM | PF00628 | PHD | coord: 1761..1805
e-value: 1.8E-7
score: 30.9
coord: 317..363
e-value: 3.8E-10
score: 39.4 |
| IPR019787 | Zinc finger, PHD-finger | PROSITE | PS50016 | ZF_PHD_2 | coord: 314..364
score: 9.971 |
| IPR004198 | Zinc finger, C5HC2-type | PFAM | PF02928 | zf-C5HC2 | coord: 696..747
e-value: 1.3E-13
score: 51.0 |
| IPR019786 | Zinc finger, PHD-type, conserved site | PROSITE | PS01359 | ZF_PHD_1 | coord: 1241..1297 |
| IPR019786 | Zinc finger, PHD-type, conserved site | PROSITE | PS01359 | ZF_PHD_1 | coord: 317..361 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 1751..1814 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 1223..1303 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 297..364 |
Blast
BLAST of TCONS_00062747-protein vs. Swiss-Prot (Human)
Match: KDM5A (Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3) HSP 1 Score: 1111.29 bits (2873), Expect = 0.000e+0 Identity = 535/1105 (48.42%), Postives = 741/1105 (67.06%), Query Frame = 0
Query: 23 SGEEFEFIPPPEAPVFEPDEEEWKDPLGYIAKIHPYAVKVGICKIRPPPDWQPPFSIDVDNFKFTPRIQKLNELEAKTRVKLNFIDAIAKFWDLQGNQIKLPNVEKKPLDIHTFHKIVQAEGGFEDVTRLRRWTRVAALMNYT-APATSGILRRHYEKILYPYDIFMSG-AMIGGDTPTEKSTTPMSKQEMKQMKNDPEYKPNGDDDVMETSSIHTRLSRNKQLEDEGIEEDCKIDYTKNPELRKLQFSAPGPKITG------------RRNKKVSDKYNAKDYETNLQKGGKNVNRFNFHSFIDDYKCRVCENGDDEDCMLLCDQCDASYHTFCLIPPLAGIPPGDWRCPKCVAKECNKPLETYGFEQAKKIYTLEDFSEMADKFKEDYFSMPPTEVPVRVVEKEFWKLVSSIDHDISVEYAADLHTADHGSGFPT-EKNSGVFSDTSEYINSPWNLNNFPNNEKSVLKYITQDISGMKVPWIYVGMCFSSFCWHTEDHWSYSINFHHWGEPKTWYGVPQSEAERLESCVKEIAPELFERNPDLFHHLVTLCSPMTLMKHGVPVFRTNQYPGEFVVTFPRAYHAGFNTGYNCAEAVNFCPAEWLPSGQECVKHYQKMRRVTVFSHDELLFKMASIPDALELDLAKKLYDCMRDVVDAEIDARHRMSRLGIMDKQREAYELINDDERQCDYCKTTIFLSGVACACDKKRLTCLNHWDKPCGCGSSKKYIRFRYTLRELPKILADLKKRADSFDNWEIAVHKVLSKTDATKIEFTALKDYITEAEESQFPECELLDQLRVYVSEAEQCSQVANQLLTKKHKTRKT-STGPTPSSPRLTLNELRDFVNQIDNLPCIIKEAAAIDKLMAQVESFRYDAKLVLNSDDYNEKKVLELLEHAETMDVDLPEINDLRLDLKASKWLESIDEILNQEDPISLDVIRSCVDQGIGLRKKQASEKPLSRLKELLYAADRWEEKAKLCLQAKPRHMVGTLEVIVQEASKVKIILPNVSALKDALFKAKDWTSKVERVHNDQYYPYYDILEALVVKGRPIPVRLEQLPQMESQVAAARAWKDRTSRTFVKKASNKLLMELLQPRKDIGKFDKKPKKK 1111
G EF+PPPE PVFEP EE+ DPL +I +I P A K GICKIRPP DWQPPF+ +V +F+FTPR+Q+LNELEA TRV+L+F+D +AKFW+LQG+ +K+P VE+K LD++ KIV ++GGFE VT+ ++W++V + + Y T +L+ HYE+ILYPY++F SG +++G P + K E + + D + P + + + R R K + G D ++N EL+KLQ GPK+ G R +KV+++ +A + + +KG +VN F+D Y C C G++ED +LLCD CD SYHTFCLIPPL +P GDWRCPKCVA+EC+KP E +GFEQA + YTL+ F EMAD FK DYF+MP VP +VEKEFW+LVSSI+ D+ VEY AD+ + D GSGFP + + + EY S WNLNN P E+SVL +I DISGMKVPW+YVGMCFSSFCWH EDHWSYSIN+ HWGEPKTWYGVP AE+LE ++E+APELFE PDL H LVT+ +P LM+HGVPV+RTNQ GEFVVTFPRAYH+GFN GYN AEAVNFC A+WLP G++CV HY+++RR VFSH+EL+FKMA+ P+ L++ LA + + + + E R + ++G++ + E +EL+ DDERQC C+TT FLS + C+C+ +RL CL H C C KK +R+RY L +LP +L +K RA S+D W V + LS K + L+ + +AE+ ++PE +L +LR V EAE C+ VA LL+KK K R++ +G T + +LT+ EL+ FV Q+ +LPC+I +A + L+ VE F A+ + + + K+ L++ ++ V+LPE+ L+ +L+ ++WL+ + L+ ++LDV++ +D G+GL A EK ++ L+ELL ++RWEEKAK+CLQA+PRH V +LE IV EA + LPNV +LK+AL KA++WT+KVE + + Y Y + LE+L KGRPIPVRLE LPQ+ESQVAAARAW++RT RTF+KK S+ L+++L PR DIG + ++
Sbjct: 7 GGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMGVQMP---NLDLKEKVEPEVLSTDTQTSPEPGTRM---NILPKRTRRVKTQSESG-------DVSRNTELKKLQIFGAGPKVVGLAMGTKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVN------FVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECSKPREAFGFEQAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVLMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFNHKKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRT--KLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDIGVYGSGKNRR 1090
The following BLAST results are available for this feature:
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